RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 PLA2G4AP47712 749 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 JAM2P57087 298 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 BST2Q10589 180 aaKnown RBP11.68□□□□□ -0.54
MSH5-212ENST00000467319 STILQ15468 1287 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 TAF12Q16514 161 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 RAB41Q5JT25 222 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 FAM78AQ5JUQ0 283 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 PARM1Q6UWI2 310 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 MTSS1LQ765P7 747 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 SCAMP5Q8TAC9 235 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 ZSCAN18Q8TBC5 510 aaPredicted RBP11.68□□□□□ -0.54
MSH5-212ENST00000467319 OVCA2Q8WZ82 227 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 SMARCD2Q92925 531 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 NXPE3Q969Y0 559 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 MCRS1Q96EZ8 462 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 UBXN6Q9BZV1 441 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 ATXN3LQ9H3M9 355 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 TSPY26PQ9H489 355 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 TASP1Q9H6P5 420 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 KCNK12Q9HB15 430 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 LIMD1Q9UGP4 676 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 MUTYHQ9UIF7 546 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 MAGED2Q9UNF1 606 aaPredicted RBP11.68□□□□□ -0.54
MSH5-212ENST00000467319 SORCS3Q9UPU3 1222 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 NUMBLQ9Y6R0 609 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 COL4A3Q01955 1670 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 ZNF840PA6NDX5 716 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 TULP2O00295 520 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 FOXN3O00409 490 aaPredicted RBP11.67□□□□□ -0.54
MSH5-212ENST00000467319 OAS1P00973 400 aaKnown RBP11.67□□□□□ -0.54
MSH5-212ENST00000467319 CDK11BP21127 795 aaKnown RBP11.67□□□□□ -0.54
MSH5-212ENST00000467319 YWHAQP27348 245 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 KIF11P52732 1056 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 UBXN1Q04323 297 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 PDE4CQ08493 712 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 TAF10Q12962 218 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 DRAP1Q14919 205 aaPredicted RBP11.67□□□□□ -0.54
MSH5-212ENST00000467319 CNGA2Q16280 664 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 ARHGAP44Q17R89 818 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 ARHGAP15Q53QZ3 475 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 GPR158Q5T848 1215 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 SNX30Q5VWJ9 437 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 CCDC186Q7Z3E2 898 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 PIGZQ86VD9 579 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 MON1AQ86VX9 555 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 PDZD8Q8NEN9 1154 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 RSAD2Q8WXG1 361 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 MRPS31Q92665 395 aaKnown RBP11.67□□□□□ -0.54
MSH5-212ENST00000467319 RSPRY1Q96DX4 576 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 STK33Q9BYT3 514 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 ACP6Q9NPH0 428 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 FAM207AQ9NSI2 230 aaPredicted RBP11.67□□□□□ -0.54
MSH5-212ENST00000467319 GMIPQ9P107 970 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 SCML2Q9UQR0 700 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 USP3Q9Y6I4 520 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 MYH10P35580 1976 aa11.67□□□□□ -0.54
MSH5-212ENST00000467319 A0A1W2PQC6 194 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 M0QYV0 167 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 CYP26A1O43174 497 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 TEX33O43247 280 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 DCXO43602 365 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 PFKLP17858 780 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 GNA15P30679 374 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 PBX1P40424 430 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 PPP3CCP48454 512 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 RPL34P49207 117 aaKnown RBP11.66□□□□□ -0.54
MSH5-212ENST00000467319 PGFP49763 221 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 TUBP50607 506 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 TDGQ13569 410 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 RAPGEF1Q13905 1077 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 BHLHA9Q7RTU4 235 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 CMTM8Q8IZV2 173 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 SLC35F5Q8WV83 523 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 KCTD13Q8WZ19 329 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 FBXO32Q969P5 355 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 ELSPBP1Q96BH3 223 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 NAP1L5Q96NT1 182 aaPredicted RBP11.66□□□□□ -0.54
MSH5-212ENST00000467319 SLITRK1Q96PX8 696 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 SLC22A12Q96S37 553 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 KXD1Q9BQD3 176 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 RPP25Q9BUL9 199 aaKnown RBP11.66□□□□□ -0.54
MSH5-212ENST00000467319 SLC46A2Q9BY10 475 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 SMOC2Q9H3U7 446 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 FBXO44Q9H4M3 255 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 SLITRK6Q9H5Y7 841 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 OBP2AQ9NY56 170 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 TRPM5Q9NZQ8 1165 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 HESX1Q9UBX0 185 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 DUSP12Q9UNI6 340 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 TECTAO75443 2155 aa11.66□□□□□ -0.54
MSH5-212ENST00000467319 C2orf78A6NCI8 922 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 PI4K2BG5E9Z4 385 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 GOLGA6L19H0YKK7 550 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 THAP12O43422 761 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 GABBR2O75899 941 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 CLCN1P35523 988 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 POLR2FP61218 127 aaKnown RBP11.65□□□□□ -0.54
MSH5-212ENST00000467319 TPM4P67936 248 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 FANCCQ00597 558 aa11.65□□□□□ -0.54
MSH5-212ENST00000467319 FCHO2Q0JRZ9 810 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms