RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 B4E1Z4 1266 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 NT5C1B-RDH14C9J2C7 533 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 N4BP3O15049 544 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 MAGEB2O15479 319 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 C22orf31O95567 290 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 GLUD1P00367 558 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 URODP06132 367 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 NAT2P11245 290 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 TDGF1P13385 188 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 TMOD1P28289 359 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 SMARCA1P28370 1054 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 RAB27AP51159 221 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 CCR3P51677 355 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 ZNF143P52747 638 aaPredicted RBP6.09□□□□□ -1.43
PTCD3-207ENST00000467273 GPC5P78333 572 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 CDC42EP1Q00587 391 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 ADCY1Q08828 1119 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 EFEMP1Q12805 493 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 SNW1Q13573 536 aaKnown RBP6.09□□□□□ -1.43
PTCD3-207ENST00000467273 ANKRD39Q53RE8 183 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 NOMO2Q5JPE7 1267 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 FOXB2Q5VYV0 432 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 ZNF852Q6ZMS4 543 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 ADAT2Q7Z6V5 191 aaKnown RBP6.09□□□□□ -1.43
PTCD3-207ENST00000467273 TMEM173Q86WV6 379 aaPredicted RBP6.09□□□□□ -1.43
PTCD3-207ENST00000467273 PPP1R14AQ96A00 147 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 RPS6KC1Q96S38 1066 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 PIGSQ96S52 555 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 MAP7D2Q96T17 732 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 TMEM175Q9BSA9 504 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 RXFP1Q9HBX9 757 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 RXFP3Q9NSD7 469 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 ZNF451Q9Y4E5 1061 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 IGF2RP11717 2491 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 MTCL1Q9Y4B5 1905 aaKnown RBP6.09□□□□□ -1.44
PTCD3-207ENST00000467273 LAMA1P25391 3075 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 RALGAPA1Q6GYQ0 2036 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 EVPLQ92817 2033 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 GREB1Q4ZG55 1949 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 A0A0D9SFI3 127 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 CCER2I3L3R5 266 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 MAN2B1O00754 1011 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 SHOXO15266 292 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 CYTH3O43739 400 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 CREB3O43889 395 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 ZNF623O75123 536 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 LRRN2O75325 713 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 PAPSS2O95340 614 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-207ENST00000467273 SOD2P04179 222 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 ALDH2P05091 517 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 CD247P20963 164 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 VIPR1P32241 457 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 RNF4P78317 190 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 CREMQ03060 361 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 RNASELQ05823 741 aaKnown RBP6.08□□□□□ -1.44
PTCD3-207ENST00000467273 AUHQ13825 339 aaKnown RBP6.08□□□□□ -1.44
PTCD3-207ENST00000467273 GRM4Q14833 912 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 SEC23AQ15436 765 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 USP17L6PQ6QN14 398 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 KIAA0907Q7Z7F0 614 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-207ENST00000467273 RNF169Q8NCN4 708 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 ZSWIM2Q8NEG5 633 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 RNF141Q8WVD5 230 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 DNASE1L2Q92874 299 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 FGF14Q92915 247 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 MAP4K1Q92918 833 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 ZNF707Q96C28 371 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-207ENST00000467273 LOXL4Q96JB6 756 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 MAP3K14Q99558 947 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 SPZ1Q9BXG8 430 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 NT5C3AQ9H0P0 336 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 NRDE2Q9H7Z3 1164 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 CNTD2Q9H8S5 307 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.08□□□□□ -1.44
PTCD3-207ENST00000467273 KCNH7Q9NS40 1196 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 TBC1D13Q9NVG8 400 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 CDH7Q9ULB5 785 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 BPTFQ12830 3046 aa6.08□□□□□ -1.44
PTCD3-207ENST00000467273 LOC400499M0QZD8 3231 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 SALL3Q9BXA9 1300 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 CNTNAP2Q9UHC6 1331 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 HELZ2Q9BYK8 2649 aaKnown RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 CCDC194A0A1B0GVG4 234 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 SRRM3A6NNA2 597 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 AGRPO00253 132 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 TAF4O00268 1085 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 PPP1R12AO14974 1030 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 TEX28O15482 410 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 ASMTLO95671 621 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 VTNP04004 478 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 ITGAVP06756 1048 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 POU2F2P09086 479 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 HNRNPA1P09651 372 aaKnown RBP eCLIP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 ZNF806P0C7X5 589 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 DARSP14868 501 aaKnown RBP6.07□□□□□ -1.44
PTCD3-207ENST00000467273 HOXA6P31267 233 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 HOXA9P31269 272 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 L1CAMP32004 1257 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 GYS2P54840 703 aa6.07□□□□□ -1.44
PTCD3-207ENST00000467273 NLRP11P59045 1033 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms