RNA–Protein interactions for RNA: ENST00000467112.5

RRP1-201, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 3,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-201ENST00000467112 CNTN3Q9P232 1028 aa15.6■□□□□ 0.09
RRP1-201ENST00000467112 STRIP2Q9ULQ0 834 aa15.6■□□□□ 0.09
RRP1-201ENST00000467112 EFR3BQ9Y2G0 817 aa15.6■□□□□ 0.09
RRP1-201ENST00000467112 GNAT1P11488 350 aa15.6■□□□□ 0.09
RRP1-201ENST00000467112 SKIP12755 728 aa15.6■□□□□ 0.09
RRP1-201ENST00000467112 CD19P15391 556 aa15.6■□□□□ 0.09
RRP1-201ENST00000467112 PGM1P36871 562 aa15.6■□□□□ 0.09
RRP1-201ENST00000467112 KRT72Q14CN4 511 aa15.6■□□□□ 0.09
RRP1-201ENST00000467112 HADHQ16836 314 aaKnown RBP15.6■□□□□ 0.09
RRP1-201ENST00000467112 SPATA18Q8TC71 538 aa15.6■□□□□ 0.09
RRP1-201ENST00000467112 TCHPQ9BT92 498 aa15.6■□□□□ 0.09
RRP1-201ENST00000467112 ZNF518BQ9C0D4 1074 aa15.6■□□□□ 0.09
RRP1-201ENST00000467112 NIF3L1Q9GZT8 377 aa15.6■□□□□ 0.09
RRP1-201ENST00000467112 ZNF395Q9H8N7 513 aaPredicted RBP15.6■□□□□ 0.09
RRP1-201ENST00000467112 STX18Q9P2W9 335 aaKnown RBP15.6■□□□□ 0.09
RRP1-201ENST00000467112 H3BRJ5 948 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 ABCD1P33897 745 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 SP2Q02086 613 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 FKBP1CQ5VVH2 108 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 XRRA1Q6P2D8 792 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 TREML1Q86YW5 311 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 CTAGE3PQ8IX95 158 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 KBTBD2Q8IY47 623 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.59■□□□□ 0.09
RRP1-201ENST00000467112 FAM161BQ96MY7 647 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 SRPK1Q96SB4 655 aaKnown RBP15.59■□□□□ 0.09
RRP1-201ENST00000467112 RGS17Q9UGC6 210 aaPredicted RBP15.59■□□□□ 0.09
RRP1-201ENST00000467112 B2RBV5 119 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 ENO1P06733 434 aaKnown RBP15.59■□□□□ 0.09
RRP1-201ENST00000467112 SUPT20HL2P0C7V6 817 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 GCLCP48506 637 aaPredicted RBP15.59■□□□□ 0.09
RRP1-201ENST00000467112 PSMC1P62191 440 aaKnown RBP15.59■□□□□ 0.09
RRP1-201ENST00000467112 MAP3K10Q02779 954 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 MMRN1Q13201 1228 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 ORC1Q13415 861 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 C11orf91Q3C1V1 193 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 SUPT20HL1Q3ZLR7 823 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 HSF5Q4G112 596 aaPredicted RBP15.59■□□□□ 0.09
RRP1-201ENST00000467112 OR52E8Q6IFG1 317 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 SLC30A9Q6PML9 568 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 BRSK2Q8IWQ3 736 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 NSUN6Q8TEA1 469 aaKnown RBP15.59■□□□□ 0.09
RRP1-201ENST00000467112 CFAP36Q96G28 342 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 DHX33Q9H6R0 707 aaKnown RBP15.59■□□□□ 0.09
RRP1-201ENST00000467112 ASB3Q9Y575 518 aa15.59■□□□□ 0.09
RRP1-201ENST00000467112 TRIM49D1C9J1S8 452 aa15.58■□□□□ 0.09
RRP1-201ENST00000467112 COPEO14579 308 aa15.58■□□□□ 0.09
RRP1-201ENST00000467112 MCF2LO15068 1137 aa15.58■□□□□ 0.09
RRP1-201ENST00000467112 AHCYL1O43865 530 aa15.58■□□□□ 0.09
RRP1-201ENST00000467112 CDH5P33151 784 aaPredicted RBP15.58■□□□□ 0.09
RRP1-201ENST00000467112 ARL2P36404 184 aa15.58■□□□□ 0.09
RRP1-201ENST00000467112 SNRNP48Q6IEG0 339 aaKnown RBP15.58■□□□□ 0.09
RRP1-201ENST00000467112 PPM1NQ8N819 430 aa15.58■□□□□ 0.09
RRP1-201ENST00000467112 SLC7A3Q8WY07 619 aa15.58■□□□□ 0.09
RRP1-201ENST00000467112 IQCGQ9H095 443 aaKnown RBP15.58■□□□□ 0.09
RRP1-201ENST00000467112 VCXQ9H320 206 aa15.58■□□□□ 0.09
RRP1-201ENST00000467112 PAPOLBQ9NRJ5 636 aaKnown RBP15.58■□□□□ 0.09
RRP1-201ENST00000467112 ZNF277Q9NRM2 450 aaPredicted RBP15.58■□□□□ 0.09
RRP1-201ENST00000467112 KRT82Q9NSB4 513 aa15.58■□□□□ 0.09
RRP1-201ENST00000467112 TEX264Q9Y6I9 313 aa15.58■□□□□ 0.09
RRP1-201ENST00000467112 APOC4-APOC2K7ER74 178 aa15.58■□□□□ 0.08
RRP1-201ENST00000467112 WNT10BO00744 389 aa15.58■□□□□ 0.08
RRP1-201ENST00000467112 APOC2P02655 101 aa15.58■□□□□ 0.08
RRP1-201ENST00000467112 CALRP27797 417 aaKnown RBP15.58■□□□□ 0.08
RRP1-201ENST00000467112 TAZQ16635 292 aa15.58■□□□□ 0.08
RRP1-201ENST00000467112 CES4AQ5XG92 561 aa15.58■□□□□ 0.08
RRP1-201ENST00000467112 THNSL1Q8IYQ7 743 aa15.58■□□□□ 0.08
RRP1-201ENST00000467112 CPXM1Q96SM3 734 aa15.58■□□□□ 0.08
RRP1-201ENST00000467112 SH3GL3Q99963 347 aa15.58■□□□□ 0.08
RRP1-201ENST00000467112 MMADHCQ9H3L0 296 aaPredicted RBP15.58■□□□□ 0.08
RRP1-201ENST00000467112 MARCOQ9UEW3 520 aaPredicted RBP15.58■□□□□ 0.08
RRP1-201ENST00000467112 SCOCQ9UIL1 159 aa15.58■□□□□ 0.08
RRP1-201ENST00000467112 PCDHGC3Q9UN70 934 aa15.58■□□□□ 0.08
RRP1-201ENST00000467112 C2CD2Q9Y426 696 aa15.58■□□□□ 0.08
RRP1-201ENST00000467112 CCDC195A0A1B0GUA6 201 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 ATG7O95352 703 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 KITP10721 976 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 MIPP30301 263 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 TFAMQ00059 246 aaKnown RBP15.57■□□□□ 0.08
RRP1-201ENST00000467112 AP1B1Q10567 949 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 DARS2Q6PI48 645 aaKnown RBP15.57■□□□□ 0.08
RRP1-201ENST00000467112 WDR49Q8IV35 697 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 ARID3BQ8IVW6 561 aaPredicted RBP15.57■□□□□ 0.08
RRP1-201ENST00000467112 PPFIBP2Q8ND30 876 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 CLPTM1LQ96KA5 538 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 FRMD8P1Q9BZ68 369 aaPredicted RBP15.57■□□□□ 0.08
RRP1-201ENST00000467112 NXF1Q9UBU9 619 aaKnown RBP15.57■□□□□ 0.08
RRP1-201ENST00000467112 KCNG1Q9UIX4 513 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 CXorf49A8MYA2 514 aaPredicted RBP15.57■□□□□ 0.08
RRP1-201ENST00000467112 CYB561D2O14569 222 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 OATP04181 439 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 RAP1GAPP47736 663 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 PAPOLAP51003 745 aaKnown RBP15.57■□□□□ 0.08
RRP1-201ENST00000467112 KDSRQ06136 332 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 BST1Q10588 318 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 TRPC3Q13507 836 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 CAPSQ13938 189 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 RBM15BQ8NDT2 890 aaKnown RBP15.57■□□□□ 0.08
RRP1-201ENST00000467112 SLC13A1Q9BZW2 595 aa15.57■□□□□ 0.08
RRP1-201ENST00000467112 ZNF302Q9NR11 478 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms