RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SMARCD2Q92925 531 aa21.49■■□□□ 1.03
SKA3-205ENST00000465471 UBXN6Q9BZV1 441 aa21.49■■□□□ 1.03
SKA3-205ENST00000465471 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.49■■□□□ 1.03
SKA3-205ENST00000465471 PI4K2BG5E9Z4 385 aa21.48■■□□□ 1.03
SKA3-205ENST00000465471 DCXO43602 365 aa21.48■■□□□ 1.03
SKA3-205ENST00000465471 ECI2O75521 394 aa21.48■■□□□ 1.03
SKA3-205ENST00000465471 BRD2P25440 801 aaKnown RBP21.48■■□□□ 1.03
SKA3-205ENST00000465471 YWHAQP27348 245 aa21.48■■□□□ 1.03
SKA3-205ENST00000465471 PPP3CCP48454 512 aa21.48■■□□□ 1.03
SKA3-205ENST00000465471 KLK7P49862 253 aa21.48■■□□□ 1.03
SKA3-205ENST00000465471 BCAT1P54687 386 aa21.48■■□□□ 1.03
SKA3-205ENST00000465471 TAF10Q12962 218 aa21.48■■□□□ 1.03
SKA3-205ENST00000465471 STILQ15468 1287 aa21.48■■□□□ 1.03
SKA3-205ENST00000465471 CNGA2Q16280 664 aa21.48■■□□□ 1.03
SKA3-205ENST00000465471 ZSCAN18Q8TBC5 510 aaPredicted RBP21.48■■□□□ 1.03
SKA3-205ENST00000465471 MRPS31Q92665 395 aaKnown RBP21.48■■□□□ 1.03
SKA3-205ENST00000465471 ELSPBP1Q96BH3 223 aa21.48■■□□□ 1.03
SKA3-205ENST00000465471 RPP25Q9BUL9 199 aaKnown RBP21.48■■□□□ 1.03
SKA3-205ENST00000465471 SLC46A2Q9BY10 475 aa21.48■■□□□ 1.03
SKA3-205ENST00000465471 DAAM1Q9Y4D1 1078 aa21.48■■□□□ 1.03
SKA3-205ENST00000465471 KIF26AQ9ULI4 1882 aaPredicted RBP21.47■■□□□ 1.03
SKA3-205ENST00000465471 CALCAP01258 141 aa21.47■■□□□ 1.03
SKA3-205ENST00000465471 ZDHHC11BP0C7U3 371 aa21.47■■□□□ 1.03
SKA3-205ENST00000465471 KRT5P13647 590 aa21.47■■□□□ 1.03
SKA3-205ENST00000465471 BST2Q10589 180 aaKnown RBP21.47■■□□□ 1.03
SKA3-205ENST00000465471 TDGQ13569 410 aa21.47■■□□□ 1.03
SKA3-205ENST00000465471 SYCP1Q15431 976 aa21.47■■□□□ 1.03
SKA3-205ENST00000465471 MEA1Q16626 185 aa21.47■■□□□ 1.03
SKA3-205ENST00000465471 RAB41Q5JT25 222 aa21.47■■□□□ 1.03
SKA3-205ENST00000465471 TXNDC8Q6A555 127 aa21.47■■□□□ 1.03
SKA3-205ENST00000465471 MON1AQ86VX9 555 aa21.47■■□□□ 1.03
SKA3-205ENST00000465471 FAM71AQ8IYT1 594 aa21.47■■□□□ 1.03
SKA3-205ENST00000465471 SLC44A3Q8N4M1 653 aa21.47■■□□□ 1.03
SKA3-205ENST00000465471 SLITRK1Q96PX8 696 aa21.47■■□□□ 1.03
SKA3-205ENST00000465471 SLITRK6Q9H5Y7 841 aa21.47■■□□□ 1.03
SKA3-205ENST00000465471 RTN4Q9NQC3 1192 aaKnown RBP21.47■■□□□ 1.03
SKA3-205ENST00000465471 A0A1B0GTH6 734 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 ZNF840PA6NDX5 716 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 FOXN3O00409 490 aaPredicted RBP21.46■■□□□ 1.03
SKA3-205ENST00000465471 XPO1O14980 1071 aaKnown RBP21.46■■□□□ 1.03
SKA3-205ENST00000465471 EPHB6O15197 1021 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 SETSIPP0DME0 302 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 ALADP13716 330 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 KIF11P52732 1056 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 UBXN1Q04323 297 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 PDE4CQ08493 712 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 SNX30Q5VWJ9 437 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 TANGO2Q6ICL3 276 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 PIGZQ86VD9 579 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 ARID3BQ8IVW6 561 aaPredicted RBP21.46■■□□□ 1.03
SKA3-205ENST00000465471 CMTM8Q8IZV2 173 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 PDZD8Q8NEN9 1154 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 ST13P5Q8NFI4 369 aaPredicted RBP21.46■■□□□ 1.03
SKA3-205ENST00000465471 FBXO32Q969P5 355 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 KXD1Q9BQD3 176 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 FBXO44Q9H4M3 255 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 TRPM5Q9NZQ8 1165 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 HESX1Q9UBX0 185 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 DUSP12Q9UNI6 340 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 USP3Q9Y6I4 520 aa21.46■■□□□ 1.03
SKA3-205ENST00000465471 HELZP42694 1942 aaKnown RBP21.46■■□□□ 1.03
SKA3-205ENST00000465471 TULP2O00295 520 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 PRAMEF12O95522 483 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 OLFM2O95897 454 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 PFKLP17858 780 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 PLA2G4AP47712 749 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 ZNF445P59923 1031 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 ZXDAP98168 799 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 DRAP1Q14919 205 aaPredicted RBP21.45■■□□□ 1.02
SKA3-205ENST00000465471 UBALD2Q8IYN6 164 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 MAB21L3Q8N8X9 362 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 RSPRY1Q96DX4 576 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 STK33Q9BYT3 514 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 PLA2G2FQ9BZM2 168 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 SMOC2Q9H3U7 446 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 TSPY26PQ9H489 355 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 ZFP14Q9HCL3 533 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 ACP6Q9NPH0 428 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 SCML2Q9UQR0 700 aa21.45■■□□□ 1.02
SKA3-205ENST00000465471 C2orf78A6NCI8 922 aa21.44■■□□□ 1.02
SKA3-205ENST00000465471 F8VZ95 297 aa21.44■■□□□ 1.02
SKA3-205ENST00000465471 TEX33O43247 280 aa21.44■■□□□ 1.02
SKA3-205ENST00000465471 OAS1P00973 400 aaKnown RBP21.44■■□□□ 1.02
SKA3-205ENST00000465471 PNMA6AP0CW24 399 aaPredicted RBP21.44■■□□□ 1.02
SKA3-205ENST00000465471 GNA15P30679 374 aa21.44■■□□□ 1.02
SKA3-205ENST00000465471 CLCN1P35523 988 aa21.44■■□□□ 1.02
SKA3-205ENST00000465471 JAM2P57087 298 aa21.44■■□□□ 1.02
SKA3-205ENST00000465471 SLC8A3P57103 927 aa21.44■■□□□ 1.02
SKA3-205ENST00000465471 IFRD2Q12894 506 aaPredicted RBP21.44■■□□□ 1.02
SKA3-205ENST00000465471 SLC35F5Q8WV83 523 aa21.44■■□□□ 1.02
SKA3-205ENST00000465471 ZNF606Q8WXB4 792 aa21.44■■□□□ 1.02
SKA3-205ENST00000465471 EDAQ92838 391 aa21.44■■□□□ 1.02
SKA3-205ENST00000465471 E2F7Q96AV8 911 aa21.44■■□□□ 1.02
SKA3-205ENST00000465471 SLC22A12Q96S37 553 aa21.44■■□□□ 1.02
SKA3-205ENST00000465471 FAM207AQ9NSI2 230 aaPredicted RBP21.44■■□□□ 1.02
SKA3-205ENST00000465471 OBP2AQ9NY56 170 aa21.44■■□□□ 1.02
SKA3-205ENST00000465471 GMIPQ9P107 970 aa21.44■■□□□ 1.02
SKA3-205ENST00000465471 COL4A2P08572 1712 aa21.43■■□□□ 1.02
SKA3-205ENST00000465471 TECTAO75443 2155 aa21.43■■□□□ 1.02
SKA3-205ENST00000465471 M0QYV0 167 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms