RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 TSPY1Q01534 308 aa16.06■□□□□ 0.16
HDAC6-214ENST00000465269 SMARCB1Q12824 385 aa16.06■□□□□ 0.16
HDAC6-214ENST00000465269 ZRSR1Q15695 479 aaKnown RBP16.06■□□□□ 0.16
HDAC6-214ENST00000465269 OSTM1Q86WC4 334 aa16.06■□□□□ 0.16
HDAC6-214ENST00000465269 ZNF513Q8N8E2 541 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-214ENST00000465269 BAHD1Q8TBE0 780 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-214ENST00000465269 SPIRE2Q8WWL2 714 aa16.06■□□□□ 0.16
HDAC6-214ENST00000465269 GAREM1Q9H706 876 aa16.06■□□□□ 0.16
HDAC6-214ENST00000465269 RAD54BQ9Y620 910 aa16.06■□□□□ 0.16
HDAC6-214ENST00000465269 CPQQ9Y646 472 aa16.06■□□□□ 0.16
HDAC6-214ENST00000465269 MYH11P35749 1972 aa16.06■□□□□ 0.16
HDAC6-214ENST00000465269 TBC1D3BA6NDS4 549 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 PLK4O00444 970 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 CILPO75339 1184 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 DKK1O94907 266 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 ADH5P11766 374 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 TCF3P15923 654 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 ACOT2P49753 483 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 PDIA5Q14554 519 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 HSF5Q4G112 596 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-214ENST00000465269 LY6G5CQ5SRR4 150 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 EGFLAMQ63HQ2 1017 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 SLC39A4Q6P5W5 647 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 PDCL2Q8N4E4 241 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 C4orf32Q8N8J7 132 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 RHBDD1Q8TEB9 315 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 ZNF419Q96HQ0 510 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-214ENST00000465269 FCRL3Q96P31 734 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-214ENST00000465269 PLIN2Q99541 437 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 PKMYT1Q99640 499 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 MSTO1Q9BUK6 570 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 MIR1-1HGQ9H1L0 117 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 DPP3Q9NY33 737 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 CFAP97Q9P2B7 532 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 CPSF3Q9UKF6 684 aaKnown RBP16.05■□□□□ 0.16
HDAC6-214ENST00000465269 L1RE1Q9UN81 338 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.05■□□□□ 0.16
HDAC6-214ENST00000465269 TEX15Q9BXT5 2789 aa16.05■□□□□ 0.16
HDAC6-214ENST00000465269 A0A0A0MRY4 1105 aa16.04■□□□□ 0.16
HDAC6-214ENST00000465269 KPNA7A9QM74 516 aa16.04■□□□□ 0.16
HDAC6-214ENST00000465269 HNRNPDLO14979 420 aaKnown RBP16.04■□□□□ 0.16
HDAC6-214ENST00000465269 TNFRSF4P43489 277 aa16.04■□□□□ 0.16
HDAC6-214ENST00000465269 FXR2P51116 673 aaKnown RBP eCLIP16.04■□□□□ 0.16
HDAC6-214ENST00000465269 MYO1EQ12965 1108 aa16.04■□□□□ 0.16
HDAC6-214ENST00000465269 NFE2Q16621 373 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-214ENST00000465269 C10orf76Q5T2E6 689 aa16.04■□□□□ 0.16
HDAC6-214ENST00000465269 DHRS13Q6UX07 377 aa16.04■□□□□ 0.16
HDAC6-214ENST00000465269 NSUN7Q8NE18 718 aaKnown RBP16.04■□□□□ 0.16
HDAC6-214ENST00000465269 TM6SF1Q9BZW5 370 aa16.04■□□□□ 0.16
HDAC6-214ENST00000465269 IKZF4Q9H2S9 585 aa16.04■□□□□ 0.16
HDAC6-214ENST00000465269 CD248Q9HCU0 757 aa16.04■□□□□ 0.16
HDAC6-214ENST00000465269 TM7SF3Q9NS93 570 aa16.04■□□□□ 0.16
HDAC6-214ENST00000465269 DDX43Q9NXZ2 648 aaKnown RBP16.04■□□□□ 0.16
HDAC6-214ENST00000465269 A0A0B4J269 797 aa16.03■□□□□ 0.16
HDAC6-214ENST00000465269 ATP2C2O75185 946 aa16.03■□□□□ 0.16
HDAC6-214ENST00000465269 NDUFS2O75306 463 aa16.03■□□□□ 0.16
HDAC6-214ENST00000465269 ABL1P00519 1130 aa16.03■□□□□ 0.16
HDAC6-214ENST00000465269 GUCY2CP25092 1073 aa16.03■□□□□ 0.16
HDAC6-214ENST00000465269 SMTNP53814 917 aa16.03■□□□□ 0.16
HDAC6-214ENST00000465269 SEMG2Q02383 582 aa16.03■□□□□ 0.16
HDAC6-214ENST00000465269 INTS6LQ5JSJ4 861 aaKnown RBP16.03■□□□□ 0.16
HDAC6-214ENST00000465269 TTC38Q5R3I4 469 aa16.03■□□□□ 0.16
HDAC6-214ENST00000465269 PDCD7Q8N8D1 485 aaKnown RBP16.03■□□□□ 0.16
HDAC6-214ENST00000465269 FSIP1Q8NA03 581 aa16.03■□□□□ 0.16
HDAC6-214ENST00000465269 IPO4Q8TEX9 1081 aaKnown RBP16.03■□□□□ 0.16
HDAC6-214ENST00000465269 MMTAG2Q9BU76 263 aaKnown RBP16.03■□□□□ 0.16
HDAC6-214ENST00000465269 FAM124BQ9H5Z6 455 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-214ENST00000465269 C17orf75Q9HAS0 396 aa16.03■□□□□ 0.16
HDAC6-214ENST00000465269 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-214ENST00000465269 SLCO1B1Q9Y6L6 691 aa16.03■□□□□ 0.16
HDAC6-214ENST00000465269 COL6A6A6NMZ7 2263 aa16.03■□□□□ 0.16
HDAC6-214ENST00000465269 ANKRD63C9JTQ0 380 aa16.02■□□□□ 0.16
HDAC6-214ENST00000465269 TULP3O75386 442 aa16.02■□□□□ 0.16
HDAC6-214ENST00000465269 GNSP15586 552 aa16.02■□□□□ 0.16
HDAC6-214ENST00000465269 WNT7BP56706 349 aa16.02■□□□□ 0.16
HDAC6-214ENST00000465269 CFHR1Q03591 330 aa16.02■□□□□ 0.16
HDAC6-214ENST00000465269 TRIM29Q14134 588 aa16.02■□□□□ 0.16
HDAC6-214ENST00000465269 IL17AQ16552 155 aa16.02■□□□□ 0.16
HDAC6-214ENST00000465269 HLA-BQ31612 363 aa16.02■□□□□ 0.16
HDAC6-214ENST00000465269 SYCP2LQ5T4T6 812 aa16.02■□□□□ 0.16
HDAC6-214ENST00000465269 KIAA1324Q6UXG2 1013 aaKnown RBP16.02■□□□□ 0.16
HDAC6-214ENST00000465269 SPATA2LQ8IUW3 424 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-214ENST00000465269 LEO1Q8WVC0 666 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-214ENST00000465269 TRIM9Q9C026 710 aa16.02■□□□□ 0.16
HDAC6-214ENST00000465269 CCSER1Q9C0I3 900 aa16.02■□□□□ 0.16
HDAC6-214ENST00000465269 SUSD2Q9UGT4 822 aa16.02■□□□□ 0.16
HDAC6-214ENST00000465269 USP9XQ93008 2570 aaPredicted RBP16.02■□□□□ 0.15
HDAC6-214ENST00000465269 MEI4A8MW99 385 aa16.01■□□□□ 0.15
HDAC6-214ENST00000465269 KCNK3O14649 394 aa16.01■□□□□ 0.15
HDAC6-214ENST00000465269 ARHGAP6O43182 974 aa16.01■□□□□ 0.15
HDAC6-214ENST00000465269 REC8O95072 547 aa16.01■□□□□ 0.15
HDAC6-214ENST00000465269 ADH1CP00326 375 aa16.01■□□□□ 0.15
HDAC6-214ENST00000465269 KRT10P13645 584 aa16.01■□□□□ 0.15
HDAC6-214ENST00000465269 NTSR1P30989 418 aa16.01■□□□□ 0.15
HDAC6-214ENST00000465269 EIF2DP41214 584 aaKnown RBP16.01■□□□□ 0.15
HDAC6-214ENST00000465269 MATKP42679 507 aa16.01■□□□□ 0.15
HDAC6-214ENST00000465269 NCKAP1LP55160 1127 aa16.01■□□□□ 0.15
HDAC6-214ENST00000465269 ME3Q16798 604 aa16.01■□□□□ 0.15
HDAC6-214ENST00000465269 ETFBKMTQ8IXQ9 262 aa16.01■□□□□ 0.15
HDAC6-214ENST00000465269 GALNT15Q8N3T1 639 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms