RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 CST3P01034 146 aaPredicted RBP11.67□□□□□ -0.54
COL11A1-207ENST00000465209 C1QTNF9P0C862 333 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 GBP1P32455 592 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 GRIK1P39086 918 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 P2RY2P41231 377 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 STAT6P42226 847 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 SLC6A11P48066 632 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 PDE6CP51160 858 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 ZNF252P-AS1Q0IIN9 211 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 MYO1EQ12965 1108 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 NR1H3Q13133 447 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 DHCR24Q15392 516 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 MAPRE1Q15691 268 aaKnown RBP11.67□□□□□ -0.54
COL11A1-207ENST00000465209 USP39Q53GS9 565 aaKnown RBP11.67□□□□□ -0.54
COL11A1-207ENST00000465209 SH3PXD2AQ5TCZ1 1133 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 PEAR1Q5VY43 1037 aaPredicted RBP11.67□□□□□ -0.54
COL11A1-207ENST00000465209 RHBDF2Q6PJF5 856 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 CCDC73Q6ZRK6 1079 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 TRAPPC11Q7Z392 1133 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 SYCP3Q8IZU3 236 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 CCDC26Q8TAB7 109 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 USP28Q96RU2 1077 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 DPEP3Q9H4B8 488 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 TRPM5Q9NZQ8 1165 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 EVLQ9UI08 416 aaPredicted RBP11.67□□□□□ -0.54
COL11A1-207ENST00000465209 MBD1Q9UIS9 605 aaPredicted RBP11.67□□□□□ -0.54
COL11A1-207ENST00000465209 RALYQ9UKM9 306 aaKnown RBP11.67□□□□□ -0.54
COL11A1-207ENST00000465209 PKD1L2Q7Z442 2459 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 ZNF233A6NK53 670 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 SCAMP3O14828 347 aaKnown RBP11.66□□□□□ -0.54
COL11A1-207ENST00000465209 TOP3BO95985 862 aaKnown RBP11.66□□□□□ -0.54
COL11A1-207ENST00000465209 PDGFRBP09619 1106 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 CSRP1P21291 193 aaKnown RBP11.66□□□□□ -0.54
COL11A1-207ENST00000465209 TXLNAP40222 546 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 PPP3CCP48454 512 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 IRX4P78413 519 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 MRPS21P82921 87 aaKnown RBP11.66□□□□□ -0.54
COL11A1-207ENST00000465209 CYP27A1Q02318 531 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 EHHADHQ08426 723 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 SLC39A14Q15043 492 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 DUOXA2Q1HG44 320 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 MAP7D1Q3KQU3 841 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 MDH1BQ5I0G3 518 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 UNQ6494/PRO21346Q6UXR6 183 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 CYP2U1Q7Z449 544 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 ETFBKMTQ8IXQ9 262 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 CCDC33Q8N5R6 958 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 ALLCQ8N6M5 410 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 FRMD1Q8N878 549 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 KDF1Q8NAX2 398 aaPredicted RBP11.66□□□□□ -0.54
COL11A1-207ENST00000465209 TXNDC5Q8NBS9 432 aaKnown RBP11.66□□□□□ -0.54
COL11A1-207ENST00000465209 DUSP9Q99956 384 aaKnown RBP11.66□□□□□ -0.54
COL11A1-207ENST00000465209 TRIM9Q9C026 710 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 ZNF518BQ9C0D4 1074 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 XYLT2Q9H1B5 865 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 TNMDQ9H2S6 317 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 TMEM9BQ9NQ34 198 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 KBTBD4Q9NVX7 518 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 HCN2Q9UL51 889 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 NBEAQ8NFP9 2946 aa11.66□□□□□ -0.54
COL11A1-207ENST00000465209 MYH10P35580 1976 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 DSPP15924 2871 aaKnown RBP11.65□□□□□ -0.54
COL11A1-207ENST00000465209 TNFRSF10BO14763 440 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 KHNYNO15037 678 aaKnown RBP11.65□□□□□ -0.54
COL11A1-207ENST00000465209 EIF3DO15371 548 aaKnown RBP eCLIP11.65□□□□□ -0.54
COL11A1-207ENST00000465209 KAT7O95251 611 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 STAU1O95793 577 aaKnown RBP11.65□□□□□ -0.54
COL11A1-207ENST00000465209 TNNC2P02585 160 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 FAM163BP0C2L3 166 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 CEACAM1P13688 526 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 SYT1P21579 422 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 PTGER3P43115 390 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 NASPP49321 788 aaPredicted RBP11.65□□□□□ -0.54
COL11A1-207ENST00000465209 CEBPZQ03701 1054 aaKnown RBP11.65□□□□□ -0.54
COL11A1-207ENST00000465209 CYP24A1Q07973 514 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 TAF10Q12962 218 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 SURF1Q15526 300 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 SNRNP35Q16560 246 aaKnown RBP11.65□□□□□ -0.54
COL11A1-207ENST00000465209 HSF5Q4G112 596 aaPredicted RBP11.65□□□□□ -0.54
COL11A1-207ENST00000465209 EMC10Q5UCC4 262 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 SNX30Q5VWJ9 437 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 DAB2IPQ5VWQ8 1189 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 CNNM4Q6P4Q7 775 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 ZNF507Q8TCN5 953 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 NOC3LQ8WTT2 800 aaKnown RBP11.65□□□□□ -0.54
COL11A1-207ENST00000465209 RLN3Q8WXF3 142 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 ZNF516Q92618 1163 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 GATA6Q92908 595 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 PNKPQ96T60 521 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 CGRRF1Q99675 332 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 B3GNT5Q9BYG0 378 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 PANK2Q9BZ23 570 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 CD248Q9HCU0 757 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 AGPAT3Q9NRZ7 376 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 TMEM74BQ9NUR3 256 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 SMPD4Q9NXE4 827 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 IL37Q9NZH6 218 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 CFAP97Q9P2B7 532 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 MTMR6Q9Y217 621 aa11.65□□□□□ -0.54
COL11A1-207ENST00000465209 CACNA1GO43497 2377 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms