RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 HNRNPABQ99729 332 aaKnown RBP13.75□□□□□ -0.21
XRN1-203ENST00000463916 SRRTQ9BXP5 876 aaKnown RBP13.75□□□□□ -0.21
XRN1-203ENST00000463916 CLSTN2Q9H4D0 955 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 IL37Q9NZH6 218 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 TRPM5Q9NZQ8 1165 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 NDRG2Q9UN36 371 aaKnown RBP13.75□□□□□ -0.21
XRN1-203ENST00000463916 CACNA1IQ9P0X4 2223 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 ABL1P00519 1130 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 YWHAQP27348 245 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 RAD23BP54727 409 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 LRMPQ12912 555 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 ZNF268Q14587 947 aaPredicted RBP13.75□□□□□ -0.21
XRN1-203ENST00000463916 ANGPT1Q15389 498 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 WDR44Q5JSH3 913 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 PPP1R26Q5T8A7 1209 aaPredicted RBP13.75□□□□□ -0.21
XRN1-203ENST00000463916 CLEC20AQ6ZU45 233 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 GPRIN1Q7Z2K8 1008 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 SLC4A11Q8NBS3 891 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 CSGALNACT1Q8TDX6 532 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 FAM3CQ92520 227 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 OSBPL6Q9BZF3 934 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 HPS4Q9NQG7 708 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 KIF26AQ9ULI4 1882 aaPredicted RBP13.74□□□□□ -0.21
XRN1-203ENST00000463916 ATP8B3O60423 1300 aa13.74□□□□□ -0.21
XRN1-203ENST00000463916 MIA3Q5JRA6 1907 aa13.74□□□□□ -0.21
XRN1-203ENST00000463916 HHLA1C9JL84 531 aa13.74□□□□□ -0.21
XRN1-203ENST00000463916 USP17L7P0C7H9 530 aa13.74□□□□□ -0.21
XRN1-203ENST00000463916 ZNF77Q15935 545 aa13.74□□□□□ -0.21
XRN1-203ENST00000463916 TRIM59Q8IWR1 403 aa13.74□□□□□ -0.21
XRN1-203ENST00000463916 LMO3Q8TAP4 145 aa13.74□□□□□ -0.21
XRN1-203ENST00000463916 ATOH1Q92858 354 aaPredicted RBP13.74□□□□□ -0.21
XRN1-203ENST00000463916 CLDN23Q96B33 292 aa13.74□□□□□ -0.21
XRN1-203ENST00000463916 CHFRQ96EP1 664 aa13.74□□□□□ -0.21
XRN1-203ENST00000463916 FAXDC2Q96IV6 333 aa13.74□□□□□ -0.21
XRN1-203ENST00000463916 EBF3Q9H4W6 596 aa13.74□□□□□ -0.21
XRN1-203ENST00000463916 EHD2Q9NZN4 543 aa13.74□□□□□ -0.21
XRN1-203ENST00000463916 ZFHX2Q9C0A1 2572 aaPredicted RBP13.74□□□□□ -0.21
XRN1-203ENST00000463916 FAM92AA1XBS5 289 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 OAS1P00973 400 aaKnown RBP13.73□□□□□ -0.21
XRN1-203ENST00000463916 ARSAP15289 507 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 KPNA1P52294 538 aaPredicted RBP13.73□□□□□ -0.21
XRN1-203ENST00000463916 CUL2Q13617 745 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 MAML2Q8IZL2 1156 aaPredicted RBP13.73□□□□□ -0.21
XRN1-203ENST00000463916 SH3RF2Q8TEC5 729 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 FBXO32Q969P5 355 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 JAKMIP2Q96AA8 810 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 HEXIM2Q96MH2 286 aaKnown RBP13.73□□□□□ -0.21
XRN1-203ENST00000463916 SLITRK1Q96PX8 696 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 NELL2Q99435 816 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 KIF9Q9HAQ2 790 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 THG1LQ9NWX6 298 aaKnown RBP13.73□□□□□ -0.21
XRN1-203ENST00000463916 RWDD2AQ9UIY3 292 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 PIEZO1Q92508 2521 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 MYH10P35580 1976 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 SPECC1L-ADORA2AF8WAN1 911 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 MAN2B1O00754 1011 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 PMM2O15305 246 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 RTN3O95197 1032 aaPredicted RBP13.73□□□□□ -0.21
XRN1-203ENST00000463916 OLFM2O95897 454 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 FAM200BP0CF97 657 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 CTHP32929 405 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 MLLT6P55198 1093 aaPredicted RBP13.73□□□□□ -0.21
XRN1-203ENST00000463916 MARSP56192 900 aaKnown RBP13.73□□□□□ -0.21
XRN1-203ENST00000463916 PLCB2Q00722 1185 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 KCNH2Q12809 1159 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 MTF1Q14872 753 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 IRF2BP1Q8IU81 584 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 C1orf210Q8IVY1 113 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 TMEM176AQ96HP8 235 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 LINC00597Q9H2U6 94 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 GMIPQ9P107 970 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 ARHGAP26Q9UNA1 814 aa13.73□□□□□ -0.21
XRN1-203ENST00000463916 CFAP54Q96N23 3096 aa13.72□□□□□ -0.21
XRN1-203ENST00000463916 CHRNB1P11230 501 aa13.72□□□□□ -0.21
XRN1-203ENST00000463916 PPP3CCP48454 512 aa13.72□□□□□ -0.21
XRN1-203ENST00000463916 USP4Q13107 963 aa13.72□□□□□ -0.21
XRN1-203ENST00000463916 RUNX3Q13761 415 aa13.72□□□□□ -0.21
XRN1-203ENST00000463916 UBR7Q8N806 425 aa13.72□□□□□ -0.21
XRN1-203ENST00000463916 KAT5Q92993 513 aa13.72□□□□□ -0.21
XRN1-203ENST00000463916 SMPD4Q9NXE4 827 aa13.72□□□□□ -0.21
XRN1-203ENST00000463916 MRPS17Q9Y2R5 130 aaKnown RBP13.72□□□□□ -0.21
XRN1-203ENST00000463916 WNT6Q9Y6F9 365 aa13.72□□□□□ -0.21
XRN1-203ENST00000463916 SCAMP3O14828 347 aaKnown RBP13.71□□□□□ -0.21
XRN1-203ENST00000463916 ZDHHC11BP0C7U3 371 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 SLC7A9P82251 487 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 ITPRIPL2Q3MIP1 535 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 DPCR1Q3MIW9 517 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 SNX30Q5VWJ9 437 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 ALYREFQ86V81 257 aaKnown RBP13.71□□□□□ -0.21
XRN1-203ENST00000463916 GPT2Q8TD30 523 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 IPO9Q96P70 1041 aaKnown RBP13.71□□□□□ -0.21
XRN1-203ENST00000463916 DUSP16Q9BY84 665 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 C8orf33Q9H7E9 229 aaPredicted RBP13.71□□□□□ -0.21
XRN1-203ENST00000463916 CCSER2Q9H7U1 834 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 LMAN1LQ9HAT1 526 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 RBM12Q9NTZ6 932 aaKnown RBP13.71□□□□□ -0.21
XRN1-203ENST00000463916 LEFTY2O00292 366 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 COCHO43405 550 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 GNA14O95837 355 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 ACO1P21399 889 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms