RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 DHCR24Q15392 516 aa18.44■□□□□ 0.54
HMGN1-209ENST00000463631 DUOXA2Q1HG44 320 aa18.44■□□□□ 0.54
HMGN1-209ENST00000463631 LMBRD2Q68DH5 695 aaPredicted RBP18.44■□□□□ 0.54
HMGN1-209ENST00000463631 DDX42Q86XP3 938 aaKnown RBP eCLIP18.44■□□□□ 0.544e-6■□□□□ 10.9
HMGN1-209ENST00000463631 CBWD2Q8IUF1 395 aa18.44■□□□□ 0.54
HMGN1-209ENST00000463631 CCDC33Q8N5R6 958 aa18.44■□□□□ 0.54
HMGN1-209ENST00000463631 ALLCQ8N6M5 410 aa18.44■□□□□ 0.54
HMGN1-209ENST00000463631 SPACA7Q96KW9 195 aa18.44■□□□□ 0.54
HMGN1-209ENST00000463631 PNKPQ96T60 521 aa18.44■□□□□ 0.54
HMGN1-209ENST00000463631 ADAM33Q9BZ11 813 aa18.44■□□□□ 0.54
HMGN1-209ENST00000463631 RNF38Q9H0F5 515 aa18.44■□□□□ 0.54
HMGN1-209ENST00000463631 PANK4Q9NVE7 773 aa18.44■□□□□ 0.54
HMGN1-209ENST00000463631 CPQQ9Y646 472 aa18.44■□□□□ 0.54
HMGN1-209ENST00000463631 ANTXRLA6NF34 631 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 ZNF233A6NK53 670 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 F8VP50 259 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 TULP1O00294 542 aaPredicted RBP18.43■□□□□ 0.54
HMGN1-209ENST00000463631 TACC1O75410 805 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 PRPF6O94906 941 aaKnown RBP18.43■□□□□ 0.54
HMGN1-209ENST00000463631 KAT7O95251 611 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 ADH1CP00326 375 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 FAM163BP0C2L3 166 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 HOXD12P35452 270 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 DPP6P42658 865 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 IRX4P78413 519 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 CYP27A1Q02318 531 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 MESP2Q0VG99 397 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 PEAR1Q5VY43 1037 aaPredicted RBP18.43■□□□□ 0.54
HMGN1-209ENST00000463631 STXBP4Q6ZWJ1 553 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 LPCAT2Q7L5N7 544 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 CLIC6Q96NY7 704 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 SLITRK1Q96PX8 696 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 FNBP1Q96RU3 617 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 DUSP9Q99956 384 aaKnown RBP18.43■□□□□ 0.54
HMGN1-209ENST00000463631 ZMIZ1Q9ULJ6 1067 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 PCNX2A6NKB5 2137 aa18.43■□□□□ 0.54
HMGN1-209ENST00000463631 MYOFQ9NZM1 2061 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 FASNP49327 2511 aaKnown RBP18.42■□□□□ 0.54
HMGN1-209ENST00000463631 VPS37CA5D8V6 355 aaPredicted RBP18.42■□□□□ 0.54
HMGN1-209ENST00000463631 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.42■□□□□ 0.54
HMGN1-209ENST00000463631 SGK1O00141 431 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 APODP05090 189 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 PDCP20941 246 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 STAT6P42226 847 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 GRIA2P42262 883 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 KIR2DL1P43626 348 aaPredicted RBP18.42■□□□□ 0.54
HMGN1-209ENST00000463631 RESTQ13127 1097 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 TRIM61Q5EBN2 209 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 MDH1BQ5I0G3 518 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 EOGTQ5NDL2 527 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 RHBDF2Q6PJF5 856 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 SYT12Q8IV01 421 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 SFTPA1Q8IWL2 248 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 PHTF2Q8N3S3 785 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 TXNDC5Q8NBS9 432 aaKnown RBP18.42■□□□□ 0.54
HMGN1-209ENST00000463631 NOC3LQ8WTT2 800 aaKnown RBP18.42■□□□□ 0.54
HMGN1-209ENST00000463631 PIGKQ92643 395 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 GATA6Q92908 595 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 OTUB2Q96DC9 234 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 ELOVL4Q9GZR5 314 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 KIAA1586Q9HCI6 787 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 POLMQ9NP87 494 aaPredicted RBP18.42■□□□□ 0.54
HMGN1-209ENST00000463631 TMEM30AQ9NV96 361 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 SMPD4Q9NXE4 827 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 CFAP97Q9P2B7 532 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 TBC1D14Q9P2M4 693 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 NME7Q9Y5B8 376 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 DMXL2Q8TDJ6 3036 aa18.42■□□□□ 0.54
HMGN1-209ENST00000463631 MYO18AQ92614 2054 aaKnown RBP18.42■□□□□ 0.54
HMGN1-209ENST00000463631 A0A087X0B3 334 aa18.41■□□□□ 0.54
HMGN1-209ENST00000463631 KLF8O95600 359 aaPredicted RBP18.41■□□□□ 0.54
HMGN1-209ENST00000463631 PDGFRBP09619 1106 aa18.41■□□□□ 0.54
HMGN1-209ENST00000463631 TNFRSF4P43489 277 aa18.41■□□□□ 0.54
HMGN1-209ENST00000463631 TAF10Q12962 218 aa18.41■□□□□ 0.54
HMGN1-209ENST00000463631 BYSLQ13895 437 aaKnown RBP18.41■□□□□ 0.54
HMGN1-209ENST00000463631 MAP7D1Q3KQU3 841 aa18.41■□□□□ 0.54
HMGN1-209ENST00000463631 TRAPPC11Q7Z392 1133 aa18.41■□□□□ 0.54
HMGN1-209ENST00000463631 C12orf40Q86WS4 652 aa18.41■□□□□ 0.54
HMGN1-209ENST00000463631 CCDC65Q8IXS2 484 aa18.41■□□□□ 0.54
HMGN1-209ENST00000463631 KCNV2Q8TDN2 545 aa18.41■□□□□ 0.54
HMGN1-209ENST00000463631 OVCA2Q8WZ82 227 aa18.41■□□□□ 0.54
HMGN1-209ENST00000463631 MMS19Q96T76 1030 aa18.41■□□□□ 0.54
HMGN1-209ENST00000463631 MRPL45Q9BRJ2 306 aaKnown RBP18.41■□□□□ 0.54
HMGN1-209ENST00000463631 ARHGEF4Q9NR80 690 aa18.41■□□□□ 0.54
HMGN1-209ENST00000463631 HSPBP1Q9NZL4 362 aa18.41■□□□□ 0.54
HMGN1-209ENST00000463631 WDFY3Q8IZQ1 3526 aa18.4■□□□□ 0.54
HMGN1-209ENST00000463631 E2F8A0AVK6 867 aa18.4■□□□□ 0.54
HMGN1-209ENST00000463631 UPK3BL1B0FP48 263 aa18.4■□□□□ 0.54
HMGN1-209ENST00000463631 UPK3BL2E5RIL1 263 aa18.4■□□□□ 0.54
HMGN1-209ENST00000463631 ADAM23O75077 832 aa18.4■□□□□ 0.54
HMGN1-209ENST00000463631 ADH5P11766 374 aa18.4■□□□□ 0.54
HMGN1-209ENST00000463631 HOXD13P35453 343 aa18.4■□□□□ 0.54
HMGN1-209ENST00000463631 GNL1P36915 607 aaPredicted RBP18.4■□□□□ 0.54
HMGN1-209ENST00000463631 PTGER3P43115 390 aa18.4■□□□□ 0.54
HMGN1-209ENST00000463631 SLC6A11P48066 632 aa18.4■□□□□ 0.54
HMGN1-209ENST00000463631 CACNA2D1P54289 1103 aa18.4■□□□□ 0.54
HMGN1-209ENST00000463631 TDRD10Q5VZ19 366 aaKnown RBP18.4■□□□□ 0.54
HMGN1-209ENST00000463631 SLC23A3Q6PIS1 610 aa18.4■□□□□ 0.54
HMGN1-209ENST00000463631 GLIS3Q8NEA6 775 aa18.4■□□□□ 0.54
HMGN1-209ENST00000463631 PDZD8Q8NEN9 1154 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms