RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 CNOT10Q9H9A5 744 aaKnown RBP10.44□□□□□ -0.74
PTPRD-207ENST00000463477 APOBEC3GQ9HC16 384 aaKnown RBP10.44□□□□□ -0.74
PTPRD-207ENST00000463477 MIOSQ9NXC5 875 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 SPG21Q9NZD8 308 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 RSPH14Q9UHP6 348 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 SNX24Q9Y343 169 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 OGTO15294 1046 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 CLDN3O15551 220 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 DDHD2O94830 711 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 ECEL1O95672 775 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 POMCP01189 267 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 RRM1P23921 792 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 GNA15P30679 374 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 MLH1P40692 756 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 ATP1A2P50993 1020 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 CDR1P51861 262 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 PLTPP55058 493 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 PPP2R2AP63151 447 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 MCL1Q07820 350 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 DSC1Q08554 894 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 NCOA4Q13772 614 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 PTK6Q13882 451 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 BYSLQ13895 437 aaKnown RBP10.43□□□□□ -0.74
PTPRD-207ENST00000463477 KRT71Q3SY84 523 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 ZNF568Q3ZCX4 644 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 TIGD5Q53EQ6 642 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 DENND2CQ68D51 928 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 PDE12Q6L8Q7 609 aaKnown RBP10.43□□□□□ -0.74
PTPRD-207ENST00000463477 TRMT10CQ7L0Y3 403 aaKnown RBP10.43□□□□□ -0.74
PTPRD-207ENST00000463477 RHOT1Q8IXI2 618 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 CCDC105Q8IYK2 499 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 KATNAL2Q8IYT4 538 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 SLC39A11Q8N1S5 342 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 MICALL1Q8N3F8 863 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 RBBP8NLQ8NC74 664 aaPredicted RBP10.43□□□□□ -0.74
PTPRD-207ENST00000463477 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.43□□□□□ -0.74
PTPRD-207ENST00000463477 ZBTB45Q96K62 511 aaPredicted RBP10.43□□□□□ -0.74
PTPRD-207ENST00000463477 BTBD6Q96KE9 485 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 ZFP42Q96MM3 310 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 FAM193BQ96PV7 902 aaPredicted RBP10.43□□□□□ -0.74
PTPRD-207ENST00000463477 TMEM175Q9BSA9 504 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 IMPG2Q9BZV3 1241 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 ZNF518BQ9C0D4 1074 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 NSUN3Q9H649 340 aaKnown RBP10.43□□□□□ -0.74
PTPRD-207ENST00000463477 SNTG2Q9NY99 539 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 ATP8A1Q9Y2Q0 1164 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 PCDHB4Q9Y5E5 795 aa10.43□□□□□ -0.74
PTPRD-207ENST00000463477 NLRC5Q86WI3 1866 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 UNC80Q8N2C7 3258 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 TCRBV7S2A1N4TA0A589 114 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 ABLIM1O14639 778 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 MCF2P10911 925 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 ITIH2P19823 946 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 CDH5P33151 784 aaPredicted RBP10.42□□□□□ -0.74
PTPRD-207ENST00000463477 GRM5P41594 1212 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 ADCY2Q08462 1091 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 KLF1Q13351 362 aaPredicted RBP10.42□□□□□ -0.74
PTPRD-207ENST00000463477 SGO2Q562F6 1265 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 MPZL3Q6UWV2 235 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 COLGALT2Q8IYK4 626 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 OR2W6PQ8NHA6 318 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 EXD1Q8NHP7 514 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 CYFIP2Q96F07 1278 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 IGSF21Q96ID5 467 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 TCHPQ9BT92 498 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 APOL6Q9BWW8 343 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 ROPN1BQ9BZX4 212 aaPredicted RBP10.42□□□□□ -0.74
PTPRD-207ENST00000463477 TRIM31Q9BZY9 425 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 ROPN1Q9HAT0 212 aaPredicted RBP10.42□□□□□ -0.74
PTPRD-207ENST00000463477 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.42□□□□□ -0.74
PTPRD-207ENST00000463477 TLR9Q9NR96 1032 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 ADAM22Q9P0K1 906 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 DNAJB4Q9UDY4 337 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 STK39Q9UEW8 545 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 CHORDC1Q9UHD1 332 aaPredicted RBP10.42□□□□□ -0.74
PTPRD-207ENST00000463477 NUB1Q9Y5A7 615 aa10.42□□□□□ -0.74
PTPRD-207ENST00000463477 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.41□□□□□ -0.74
PTPRD-207ENST00000463477 NT5C1B-RDH14C9J2C7 533 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 NDUFAB1O14561 156 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 B4GALT3O60512 393 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 RECQL4O94761 1208 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 FAM107AO95990 144 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 GAS8O95995 478 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 CALB1P05937 261 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 MMP8P22894 467 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 PTPN7P35236 360 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 PBX3P40426 434 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 CCT5P48643 541 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 SLC11A1P49279 550 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 SCNN1GP51170 649 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 ERVFC1P60507 584 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 IFFO1Q0D2I5 559 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 CALCOCO2Q13137 446 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 MAMLD1Q13495 774 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 COL19A1Q14993 1142 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 SGSM1Q2NKQ1 1148 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 TNFAIP8L3Q5GJ75 292 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 TCEAL5Q5H9L2 206 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 ZBTB41Q5SVQ8 909 aa10.41□□□□□ -0.74
PTPRD-207ENST00000463477 C6orf118Q5T5N4 469 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms