RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 OLFM2O95897 454 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 PSMC2P35998 433 aaKnown RBP12.65□□□□□ -0.38
RTCB-202ENST00000463455 CXCL12P48061 93 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 SOX9P48436 509 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 TNK2Q07912 1038 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 TMEM196Q5HYL7 178 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 TXNDC11Q6PKC3 985 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 ELOA2Q8IYF1 753 aaPredicted RBP12.65□□□□□ -0.38
RTCB-202ENST00000463455 FMR1NBQ8N0W7 255 aaPredicted RBP12.65□□□□□ -0.38
RTCB-202ENST00000463455 CRYBG2Q8N1P7 616 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 CPA6Q8N4T0 437 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 SUMF1Q8NBK3 374 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 RUBCNQ92622 972 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 SMARCD1Q96GM5 515 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 CHAMP1Q96JM3 812 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 GSDMAQ96QA5 445 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 DNAI2Q9GZS0 605 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 SMG9Q9H0W8 520 aaKnown RBP12.65□□□□□ -0.38
RTCB-202ENST00000463455 SMYD3Q9H7B4 428 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 CYP3A43Q9HB55 503 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 TRPC7Q9HCX4 862 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 DMAP1Q9NPF5 467 aaPredicted RBP12.65□□□□□ -0.38
RTCB-202ENST00000463455 IL37Q9NZH6 218 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 HOOK1Q9UJC3 728 aaKnown RBP12.65□□□□□ -0.38
RTCB-202ENST00000463455 GPR179Q6PRD1 2367 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 SPTBN4Q9H254 2564 aa12.65□□□□□ -0.39
RTCB-202ENST00000463455 HELZP42694 1942 aaKnown RBP12.64□□□□□ -0.39
RTCB-202ENST00000463455 FAM92AA1XBS5 289 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 ZNF840PA6NDX5 716 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 STX10O60499 249 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 HDCP19113 662 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 CNR2P34972 360 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 PIK3CAP42336 1068 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 TUBP50607 506 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 DLG4P78352 724 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 SLC7A9P82251 487 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 INCA1Q0VD86 236 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 GRSF1Q12849 480 aaKnown RBP eCLIP12.64□□□□□ -0.39
RTCB-202ENST00000463455 NR1H3Q13133 447 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 ADAM9Q13443 819 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 FBXO43Q4G163 708 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 C1orf220Q5T0J3 134 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 FAM35AQ86V20 835 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 DDX42Q86XP3 938 aaKnown RBP eCLIP12.64□□□□□ -0.39
RTCB-202ENST00000463455 FAM186BQ8IYM0 893 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 NUP93Q8N1F7 819 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 TTC39CQ8N584 583 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 GPR161Q8N6U8 529 aaKnown RBP12.64□□□□□ -0.39
RTCB-202ENST00000463455 ARL14EPQ8N8R7 260 aaPredicted RBP12.64□□□□□ -0.39
RTCB-202ENST00000463455 CCDC150Q8NCX0 1101 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 STKLD1Q8NE28 680 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 CCDC26Q8TAB7 109 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 SPATA20Q8TB22 786 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 TIGD1Q96MW7 591 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 DUSP9Q99956 384 aaKnown RBP12.64□□□□□ -0.39
RTCB-202ENST00000463455 B3GNT5Q9BYG0 378 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 ZNF518BQ9C0D4 1074 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 DPEP3Q9H4B8 488 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 EBF3Q9H4W6 596 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 TMEM8AQ9HCN3 771 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 DUS2Q9NX74 493 aaKnown RBP12.64□□□□□ -0.39
RTCB-202ENST00000463455 PCDHGA10Q9Y5H3 936 aa12.64□□□□□ -0.39
RTCB-202ENST00000463455 CCDC163A0A0D9SF12 145 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 C2orf78A6NCI8 922 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 SLC9A3R1O14745 358 aaPredicted RBP12.63□□□□□ -0.39
RTCB-202ENST00000463455 GPR37O15354 613 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 ATG13O75143 517 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 CLSTN1O94985 981 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 SMC2O95347 1197 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 NFATC1O95644 943 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 OAS1P00973 400 aaKnown RBP12.63□□□□□ -0.39
RTCB-202ENST00000463455 HLA-DRAP01903 254 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 DRD1P21728 446 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 YWHAQP27348 245 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 ASPAP45381 313 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 IFNAR2P48551 515 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 USP46P62068 366 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 GAS6Q14393 721 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 PON2Q15165 354 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 SNX30Q5VWJ9 437 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 RIN3Q8TB24 985 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 SH3RF2Q8TEC5 729 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 SECISBP2LQ93073 1101 aaKnown RBP12.63□□□□□ -0.39
RTCB-202ENST00000463455 CYP2S1Q96SQ9 504 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 NIF3L1Q9GZT8 377 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 ECT2Q9H8V3 914 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 GDPD2Q9HCC8 539 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 CSNK1G1Q9HCP0 422 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 PNPLA8Q9NP80 782 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 CFAP54Q96N23 3096 aa12.63□□□□□ -0.39
RTCB-202ENST00000463455 CHURC1-FNTBB4DL54 471 aa12.62□□□□□ -0.39
RTCB-202ENST00000463455 CETN3O15182 167 aa12.62□□□□□ -0.39
RTCB-202ENST00000463455 SLC16A3O15427 465 aaKnown RBP12.62□□□□□ -0.39
RTCB-202ENST00000463455 EPB41P11171 864 aaKnown RBP12.62□□□□□ -0.39
RTCB-202ENST00000463455 GJA4P35212 333 aa12.62□□□□□ -0.39
RTCB-202ENST00000463455 PPP1R2P41236 205 aa12.62□□□□□ -0.39
RTCB-202ENST00000463455 CDH8P55286 799 aa12.62□□□□□ -0.39
RTCB-202ENST00000463455 TAF10Q12962 218 aa12.62□□□□□ -0.39
RTCB-202ENST00000463455 EML3Q32P44 896 aa12.62□□□□□ -0.39
RTCB-202ENST00000463455 WDR44Q5JSH3 913 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms