RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 TEX28O15482 410 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 LINC01565O15544 149 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 STX10O60499 249 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 AKAP3O75969 853 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 ABLIM3O94929 683 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 ALX3O95076 343 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 GNA14O95837 355 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 GLUD1P00367 558 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 EPB41P11171 864 aaKnown RBP5.56□□□□□ -1.52
PDCD4-204ENST00000462577 ODC1P11926 461 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 KRT13P13646 458 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 TNNI1P19237 187 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 IGFBP6P24592 240 aaPredicted RBP5.56□□□□□ -1.52
PDCD4-204ENST00000462577 ITGB7P26010 798 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 NOS3P29474 1203 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 POLR2BP30876 1174 aaKnown RBP5.56□□□□□ -1.52
PDCD4-204ENST00000462577 HOXA9P31269 272 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 GTF2F1P35269 517 aaKnown RBP eCLIP5.56□□□□□ -1.52
PDCD4-204ENST00000462577 VAMP7P51809 220 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 GUCY2FP51841 1108 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 PMS1P54277 932 aaKnown RBP5.56□□□□□ -1.52
PDCD4-204ENST00000462577 NLRP12P59046 1061 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 TFAMQ00059 246 aaKnown RBP5.56□□□□□ -1.52
PDCD4-204ENST00000462577 YWHAHQ04917 246 aaPredicted RBP5.56□□□□□ -1.52
PDCD4-204ENST00000462577 MYO1EQ12965 1108 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 SMAD4Q13485 552 aaKnown RBP5.56□□□□□ -1.52
PDCD4-204ENST00000462577 CAMK4Q16566 473 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 AAK1Q2M2I8 961 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 KLHL40Q2TBA0 621 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 CCDC183Q5T5S1 534 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 TPGS2Q68CL5 300 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 ZNF280DQ6N043 979 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 KIAA1841Q6NSI8 718 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 ANKRD54Q6NXT1 300 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 PRSS55Q6UWB4 352 aaPredicted RBP5.56□□□□□ -1.52
PDCD4-204ENST00000462577 RSPO2Q6UXX9 243 aaPredicted RBP5.56□□□□□ -1.52
PDCD4-204ENST00000462577 TRAPPC11Q7Z392 1133 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 FILIP1Q7Z7B0 1213 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 GLYCTKQ8IVS8 523 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 TMEM86AQ8N2M4 240 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 SMRP1Q8NCR6 262 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 GALNT11Q8NCW6 608 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 MICAL1Q8TDZ2 1067 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 C2orf15Q8WU43 125 aaKnown RBP5.56□□□□□ -1.52
PDCD4-204ENST00000462577 NELFBQ8WX92 580 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 AUTS2Q8WXX7 1259 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 RABGGTAQ92696 567 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 TAF4BQ92750 862 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 PMEPA1Q969W9 287 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 SYAP1Q96A49 352 aaPredicted RBP5.56□□□□□ -1.52
PDCD4-204ENST00000462577 HHIPQ96QV1 700 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 DUSP9Q99956 384 aaKnown RBP5.56□□□□□ -1.52
PDCD4-204ENST00000462577 CLSTN3Q9BQT9 956 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 XYLT2Q9H1B5 865 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 PLEKHA4Q9H4M7 779 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 SFXN1Q9H9B4 322 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 METTL14Q9HCE5 456 aaKnown RBP5.56□□□□□ -1.52
PDCD4-204ENST00000462577 TMEM8AQ9HCN3 771 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 ZDHHC7Q9NXF8 308 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 CLDND1Q9NY35 253 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 CLEC1BQ9P126 229 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 CD207Q9UJ71 328 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 AGAP1Q9UPQ3 857 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 CTNND2Q9UQB3 1225 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 COQ4Q9Y3A0 265 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 HCFC2Q9Y5Z7 792 aa5.56□□□□□ -1.52
PDCD4-204ENST00000462577 DOCK4Q8N1I0 1966 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 BIN1O00499 593 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 GABRDO14764 452 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 PER2O15055 1255 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 P4HA2O15460 535 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 MBTPS2O43462 519 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 HUS1O60921 280 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 PHACTR2O75167 634 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 TACC1O75410 805 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 VNN1O95497 513 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 FGFR1OPO95684 399 aaKnown RBP5.55□□□□□ -1.52
PDCD4-204ENST00000462577 ASS1P00966 412 aaKnown RBP5.55□□□□□ -1.52
PDCD4-204ENST00000462577 HNRNPA1P09651 372 aaKnown RBP eCLIP5.55□□□□□ -1.52
PDCD4-204ENST00000462577 DLATP10515 647 aaKnown RBP5.55□□□□□ -1.52
PDCD4-204ENST00000462577 EPCAMP16422 314 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 EPHA1P21709 976 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 WARSP23381 471 aaKnown RBP5.55□□□□□ -1.52
PDCD4-204ENST00000462577 KLRC2P26717 231 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 DLG4P78352 724 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 MRPS5P82675 430 aaKnown RBP5.55□□□□□ -1.52
PDCD4-204ENST00000462577 ROR1Q01973 937 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 ITIH3Q06033 890 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 DLX2Q07687 328 aaPredicted RBP5.55□□□□□ -1.52
PDCD4-204ENST00000462577 PPP3CAQ08209 521 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 SMARCB1Q12824 385 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 GPR17Q13304 367 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 CCDC85BQ15834 202 aaPredicted RBP5.55□□□□□ -1.52
PDCD4-204ENST00000462577 UVSSAQ2YD98 709 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 DPCR1Q3MIW9 517 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 XP32Q5T750 250 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 TDRD10Q5VZ19 366 aaKnown RBP5.55□□□□□ -1.52
PDCD4-204ENST00000462577 KRT39Q6A163 491 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 OVOS1Q6IE37 1185 aa5.55□□□□□ -1.52
PDCD4-204ENST00000462577 SYCE2Q6PIF2 218 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms