RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 BRCC3P46736 316 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 PLA2G4AP47712 749 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 OR1G1P47890 313 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 KCNJ1P48048 391 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 FNTAP49354 379 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 GSCP56915 257 aaPredicted RBP7.13□□□□□ -1.27
MSH2-204ENST00000461394 DYNLT1P63172 113 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 ATP11AP98196 1134 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 PLCB3Q01970 1234 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 KRT17Q04695 432 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 ZNF252P-AS1Q0IIN9 211 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 CALCOCO2Q13137 446 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 NNTQ13423 1086 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 TUSC3Q13454 348 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 KCTD19Q17RG1 926 aaPredicted RBP7.13□□□□□ -1.27
MSH2-204ENST00000461394 ATP13A4Q4VNC1 1196 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 CFAP58Q5T655 872 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 LRRC38Q5VT99 294 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 LHX8Q68G74 356 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 PMF1Q6P1K2 205 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 MFSD7Q6UXD7 560 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 ZNF365Q70YC5 407 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 ZDHHC17Q8IUH5 632 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 SCUBE3Q8IX30 993 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 CRYBG2Q8N1P7 616 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 THEM5Q8N1Q8 247 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 NIPA2Q8N8Q9 360 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.13□□□□□ -1.27
MSH2-204ENST00000461394 FNIP1Q8TF40 1166 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 UBLCP1Q8WVY7 318 aaPredicted RBP7.13□□□□□ -1.27
MSH2-204ENST00000461394 ATG4AQ8WYN0 398 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 ZDHHC16Q969W1 377 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 FAM149B1Q96BN6 582 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 LRRC45Q96CN5 670 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 HAUS1Q96CS2 278 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 FAM118BQ9BPY3 351 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 ERP44Q9BS26 406 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 CNPY3Q9BT09 278 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 CALN1Q9BXU9 219 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 DCLK3Q9C098 648 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 RNF208Q9H0X6 261 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 NGRNQ9NPE2 291 aaKnown RBP7.13□□□□□ -1.27
MSH2-204ENST00000461394 KRT82Q9NSB4 513 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 MTRF1LQ9UGC7 380 aaKnown RBP7.13□□□□□ -1.27
MSH2-204ENST00000461394 FEZ2Q9UHY8 353 aaPredicted RBP7.13□□□□□ -1.27
MSH2-204ENST00000461394 DSEQ9UL01 958 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 HPCAL4Q9UM19 191 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 SNX24Q9Y343 169 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 NME7Q9Y5B8 376 aa7.13□□□□□ -1.27
MSH2-204ENST00000461394 SYNJ2BP-COX16A0A087WUM0 186 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 DNM1LO00429 736 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 MAP2K7O14733 419 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 XPO1O14980 1071 aaKnown RBP7.12□□□□□ -1.27
MSH2-204ENST00000461394 OPA1O60313 960 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 LRCH4O75427 683 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 TRUB2O95900 331 aaKnown RBP7.12□□□□□ -1.27
MSH2-204ENST00000461394 EOMESO95936 686 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 FAM163BP0C2L3 166 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 FAM153BP0C7A2 387 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 CCL5P13501 91 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 ATF2P15336 505 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 TKTP29401 623 aaKnown RBP7.12□□□□□ -1.27
MSH2-204ENST00000461394 MIPP30301 263 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 RDXP35241 583 aaKnown RBP7.12□□□□□ -1.27
MSH2-204ENST00000461394 VPS41P49754 854 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 SULT1E1P49888 294 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 AFF1P51825 1210 aaKnown RBP7.12□□□□□ -1.27
MSH2-204ENST00000461394 ZNF143P52747 638 aaPredicted RBP7.12□□□□□ -1.27
MSH2-204ENST00000461394 PLTPP55058 493 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 CDH6P55285 790 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 MAP3K7CLP57077 242 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 COPS2P61201 443 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 USP46P62068 366 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 TSPY1Q01534 308 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 LMNB2Q03252 620 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 ADIGQ0VDE8 80 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 ACAP1Q15027 740 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 TRADDQ15628 312 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 TRIP13Q15645 432 aaPredicted RBP7.12□□□□□ -1.27
MSH2-204ENST00000461394 C15orf59Q2T9L4 293 aaPredicted RBP7.12□□□□□ -1.27
MSH2-204ENST00000461394 FAM153CQ494X1 144 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 TFDP3Q5H9I0 405 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 NOMO2Q5JPE7 1267 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 KCNT1Q5JUK3 1230 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 EFHC1Q5JVL4 640 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 TXNRD3NBQ6F5E7 133 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 ASTLQ6HA08 431 aaPredicted RBP7.12□□□□□ -1.27
MSH2-204ENST00000461394 TTC27Q6P3X3 843 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 SLC24A5Q71RS6 500 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 POLNQ7Z5Q5 900 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 C12orf50Q8NA57 414 aaPredicted RBP7.12□□□□□ -1.27
MSH2-204ENST00000461394 FAM172AQ8WUF8 416 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 SLC35F5Q8WV83 523 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.12□□□□□ -1.27
MSH2-204ENST00000461394 RAPGEF5Q92565 580 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 SEPT8Q92599 483 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 CAVIN3Q969G5 261 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 CFAP57Q96MR6 1250 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 FMO2Q99518 471 aa7.12□□□□□ -1.27
MSH2-204ENST00000461394 HNRNPABQ99729 332 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms