RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 ADORA2BP29275 332 aa23.84■■□□□ 1.41
TRAF4-207ENST00000461195 MLLT6P55198 1093 aaPredicted RBP23.84■■□□□ 1.41
TRAF4-207ENST00000461195 ARL14EPQ8N8R7 260 aaPredicted RBP23.84■■□□□ 1.41
TRAF4-207ENST00000461195 ATOH1Q92858 354 aaPredicted RBP23.84■■□□□ 1.41
TRAF4-207ENST00000461195 SLC22A12Q96S37 553 aa23.84■■□□□ 1.41
TRAF4-207ENST00000461195 CYP2S1Q96SQ9 504 aa23.84■■□□□ 1.41
TRAF4-207ENST00000461195 SMOQ99835 787 aa23.84■■□□□ 1.41
TRAF4-207ENST00000461195 ARID3AQ99856 593 aa23.84■■□□□ 1.41
TRAF4-207ENST00000461195 NUP62CLQ9H1M0 184 aa23.84■■□□□ 1.41
TRAF4-207ENST00000461195 CSNK1G1Q9HCP0 422 aa23.84■■□□□ 1.41
TRAF4-207ENST00000461195 DLGAP2Q9P1A6 1054 aa23.84■■□□□ 1.41
TRAF4-207ENST00000461195 MTF2Q9Y483 593 aaPredicted RBP23.84■■□□□ 1.41
TRAF4-207ENST00000461195 HELZP42694 1942 aaKnown RBP23.83■■□□□ 1.41
TRAF4-207ENST00000461195 ZNF840PA6NDX5 716 aa23.83■■□□□ 1.41
TRAF4-207ENST00000461195 TNFRSF10BO14763 440 aa23.83■■□□□ 1.41
TRAF4-207ENST00000461195 HDCP19113 662 aa23.83■■□□□ 1.41
TRAF4-207ENST00000461195 SLC5A3P53794 718 aa23.83■■□□□ 1.41
TRAF4-207ENST00000461195 MARSP56192 900 aaKnown RBP23.83■■□□□ 1.41
TRAF4-207ENST00000461195 CETN1Q12798 172 aa23.83■■□□□ 1.41
TRAF4-207ENST00000461195 ZNF394Q53GI3 561 aa23.83■■□□□ 1.41
TRAF4-207ENST00000461195 MLKLQ8NB16 471 aa23.83■■□□□ 1.41
TRAF4-207ENST00000461195 PDZD8Q8NEN9 1154 aa23.83■■□□□ 1.41
TRAF4-207ENST00000461195 ZMIZ2Q8NF64 920 aa23.83■■□□□ 1.41
TRAF4-207ENST00000461195 FBXO32Q969P5 355 aa23.83■■□□□ 1.41
TRAF4-207ENST00000461195 MSANTD3Q96H12 275 aa23.83■■□□□ 1.41
TRAF4-207ENST00000461195 COMMD8Q9NX08 183 aa23.83■■□□□ 1.41
TRAF4-207ENST00000461195 PATJQ8NI35 1801 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 SHISA7A6NL88 538 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 P4HA2O15460 535 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 GFRA3O60609 400 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 BEST1O76090 585 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 ABL1P00519 1130 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 CCDC192P0DO97 292 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 TARSP26639 723 aaKnown RBP23.82■■□□□ 1.4
TRAF4-207ENST00000461195 KPNA1P52294 538 aaPredicted RBP23.82■■□□□ 1.4
TRAF4-207ENST00000461195 MAP3K7CLP57077 242 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 CUL2Q13617 745 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 CC2D1AQ6P1N0 951 aaPredicted RBP23.82■■□□□ 1.4
TRAF4-207ENST00000461195 TRIM59Q8IWR1 403 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 SCAMP5Q8TAC9 235 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 OVCA2Q8WZ82 227 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 FAM3CQ92520 227 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 TMEM176AQ96HP8 235 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 HEXIM2Q96MH2 286 aaKnown RBP23.82■■□□□ 1.4
TRAF4-207ENST00000461195 C8orf33Q9H7E9 229 aaPredicted RBP23.82■■□□□ 1.4
TRAF4-207ENST00000461195 GKN1Q9NS71 199 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 IL37Q9NZH6 218 aa23.82■■□□□ 1.4
TRAF4-207ENST00000461195 H0Y858 1186 aa23.81■■□□□ 1.4
TRAF4-207ENST00000461195 NCAM2O15394 837 aa23.81■■□□□ 1.4
TRAF4-207ENST00000461195 YWHAEP62258 255 aaKnown RBP23.81■■□□□ 1.4
TRAF4-207ENST00000461195 C1orf228Q6PIY5 440 aa23.81■■□□□ 1.4
TRAF4-207ENST00000461195 FAM83CQ9BQN1 747 aa23.81■■□□□ 1.4
TRAF4-207ENST00000461195 GTSE1Q9NYZ3 720 aa23.81■■□□□ 1.4
TRAF4-207ENST00000461195 ARHGAP26Q9UNA1 814 aa23.81■■□□□ 1.4
TRAF4-207ENST00000461195 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.81■■□□□ 1.4
TRAF4-207ENST00000461195 TBXAS1P24557 533 aaPredicted RBP23.8■■□□□ 1.4
TRAF4-207ENST00000461195 MAGEA9P43362 315 aa23.8■■□□□ 1.4
TRAF4-207ENST00000461195 RAD23BP54727 409 aa23.8■■□□□ 1.4
TRAF4-207ENST00000461195 TNK2Q07912 1038 aa23.8■■□□□ 1.4
TRAF4-207ENST00000461195 KCNH2Q12809 1159 aa23.8■■□□□ 1.4
TRAF4-207ENST00000461195 LRMPQ12912 555 aa23.8■■□□□ 1.4
TRAF4-207ENST00000461195 MTF1Q14872 753 aa23.8■■□□□ 1.4
TRAF4-207ENST00000461195 ZNF77Q15935 545 aa23.8■■□□□ 1.4
TRAF4-207ENST00000461195 PPP1R26Q5T8A7 1209 aaPredicted RBP23.8■■□□□ 1.4
TRAF4-207ENST00000461195 CLEC20AQ6ZU45 233 aa23.8■■□□□ 1.4
TRAF4-207ENST00000461195 SLC4A11Q8NBS3 891 aa23.8■■□□□ 1.4
TRAF4-207ENST00000461195 RIN3Q8TB24 985 aa23.8■■□□□ 1.4
TRAF4-207ENST00000461195 NT5C1BQ96P26 610 aa23.8■■□□□ 1.4
TRAF4-207ENST00000461195 FBXO44Q9H4M3 255 aa23.8■■□□□ 1.4
TRAF4-207ENST00000461195 NDRG2Q9UN36 371 aaKnown RBP23.8■■□□□ 1.4
TRAF4-207ENST00000461195 PTPRZ1P23471 2315 aaPredicted RBP23.79■■□□□ 1.4
TRAF4-207ENST00000461195 FAM92AA1XBS5 289 aa23.79■■□□□ 1.4
TRAF4-207ENST00000461195 OAS1P00973 400 aaKnown RBP23.79■■□□□ 1.4
TRAF4-207ENST00000461195 AFPP02771 609 aaKnown RBP23.79■■□□□ 1.4
TRAF4-207ENST00000461195 TCF3P15923 654 aa23.79■■□□□ 1.4
TRAF4-207ENST00000461195 USP4Q13107 963 aa23.79■■□□□ 1.4
TRAF4-207ENST00000461195 ITPRIPL2Q3MIP1 535 aa23.79■■□□□ 1.4
TRAF4-207ENST00000461195 RALGPS2Q86X27 583 aaPredicted RBP23.79■■□□□ 1.4
TRAF4-207ENST00000461195 TTC16Q8NEE8 873 aa23.79■■□□□ 1.4
TRAF4-207ENST00000461195 TTC8Q8TAM2 541 aa23.79■■□□□ 1.4
TRAF4-207ENST00000461195 SH3RF2Q8TEC5 729 aa23.79■■□□□ 1.4
TRAF4-207ENST00000461195 CLDN23Q96B33 292 aa23.79■■□□□ 1.4
TRAF4-207ENST00000461195 PNPLA8Q9NP80 782 aa23.79■■□□□ 1.4
TRAF4-207ENST00000461195 CHORDC1Q9UHD1 332 aaPredicted RBP23.79■■□□□ 1.4
TRAF4-207ENST00000461195 F5P12259 2224 aa23.78■■□□□ 1.4
TRAF4-207ENST00000461195 SPECC1L-ADORA2AF8WAN1 911 aa23.78■■□□□ 1.4
TRAF4-207ENST00000461195 GOLGA6L22H0YM25 854 aa23.78■■□□□ 1.4
TRAF4-207ENST00000461195 OLFM2O95897 454 aa23.78■■□□□ 1.4
TRAF4-207ENST00000461195 SOX9P48436 509 aa23.78■■□□□ 1.4
TRAF4-207ENST00000461195 SLC7A9P82251 487 aa23.78■■□□□ 1.4
TRAF4-207ENST00000461195 RUNX3Q13761 415 aa23.78■■□□□ 1.4
TRAF4-207ENST00000461195 PDGFRLQ15198 375 aa23.78■■□□□ 1.4
TRAF4-207ENST00000461195 ANGPT1Q15389 498 aa23.78■■□□□ 1.4
TRAF4-207ENST00000461195 SNX30Q5VWJ9 437 aa23.78■■□□□ 1.4
TRAF4-207ENST00000461195 MED15Q96RN5 788 aa23.78■■□□□ 1.4
TRAF4-207ENST00000461195 DUSP16Q9BY84 665 aa23.78■■□□□ 1.4
TRAF4-207ENST00000461195 RNF38Q9H0F5 515 aa23.78■■□□□ 1.4
TRAF4-207ENST00000461195 MYO16Q9Y6X6 1858 aa23.78■■□□□ 1.4
TRAF4-207ENST00000461195 MYO15AQ9UKN7 3530 aa23.77■■□□□ 1.4
TRAF4-207ENST00000461195 HHLA1C9JL84 531 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms