RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 ST13P5Q8NFI4 369 aaPredicted RBP11.47□□□□□ -0.57
CCDC12-204ENST00000460035 SCAMP5Q8TAC9 235 aa11.47□□□□□ -0.57
CCDC12-204ENST00000460035 SHKBP1Q8TBC3 707 aa11.47□□□□□ -0.57
CCDC12-204ENST00000460035 ADAMTS19Q8TE59 1207 aa11.47□□□□□ -0.57
CCDC12-204ENST00000460035 ZSWIM1Q9BR11 485 aa11.47□□□□□ -0.57
CCDC12-204ENST00000460035 TTLL2Q9BWV7 592 aa11.47□□□□□ -0.57
CCDC12-204ENST00000460035 GPR88Q9GZN0 384 aa11.47□□□□□ -0.57
CCDC12-204ENST00000460035 PDCL3Q9H2J4 239 aa11.47□□□□□ -0.57
CCDC12-204ENST00000460035 IL21Q9HBE4 155 aa11.47□□□□□ -0.57
CCDC12-204ENST00000460035 PNPLA8Q9NP80 782 aa11.47□□□□□ -0.57
CCDC12-204ENST00000460035 TRPM5Q9NZQ8 1165 aa11.47□□□□□ -0.57
CCDC12-204ENST00000460035 LIMD1Q9UGP4 676 aa11.47□□□□□ -0.57
CCDC12-204ENST00000460035 CHORDC1Q9UHD1 332 aaPredicted RBP11.47□□□□□ -0.57
CCDC12-204ENST00000460035 CDH7Q9ULB5 785 aa11.47□□□□□ -0.57
CCDC12-204ENST00000460035 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCDC12-204ENST00000460035 UNC80Q8N2C7 3258 aa11.47□□□□□ -0.57
CCDC12-204ENST00000460035 F8VZ95 297 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 TULP2O00295 520 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 TNFRSF10BO14763 440 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 MOSPD3O75425 235 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 F11P03951 625 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 LAMP2P13473 410 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 KRT9P35527 623 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 SOX5P35711 763 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 PBX1P40424 430 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 RGS7P49802 495 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 SLC5A3P53794 718 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 JAM2P57087 298 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 CYP4F8P98187 520 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 ARID5AQ03989 594 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 BST2Q10589 180 aaKnown RBP11.46□□□□□ -0.57
CCDC12-204ENST00000460035 TAF10Q12962 218 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 PKDCCQ504Y2 493 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 DENND1BQ6P3S1 775 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 PIGZQ86VD9 579 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 NPAS3Q8IXF0 933 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 CPLX3Q8WVH0 158 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 MRPS31Q92665 395 aaKnown RBP11.46□□□□□ -0.57
CCDC12-204ENST00000460035 SECISBP2LQ93073 1101 aaKnown RBP11.46□□□□□ -0.57
CCDC12-204ENST00000460035 FBXO32Q969P5 355 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 SLITRK1Q96PX8 696 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 UHRF1Q96T88 793 aaPredicted RBP11.46□□□□□ -0.57
CCDC12-204ENST00000460035 UBXN6Q9BZV1 441 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 FBXO44Q9H4M3 255 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 LRRC4Q9HBW1 653 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 COMMD8Q9NX08 183 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 IL37Q9NZH6 218 aa11.46□□□□□ -0.57
CCDC12-204ENST00000460035 ZFP37Q9Y6Q3 630 aaPredicted RBP11.46□□□□□ -0.57
CCDC12-204ENST00000460035 F5P12259 2224 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 XIRP2A4UGR9 3374 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 NCANO14594 1321 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 FAM92AA1XBS5 289 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 C19orf67A6NJJ6 358 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 LOC730098B7Z3J9 87 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 HHLA1C9JL84 531 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 NRG2O14511 850 aaPredicted RBP11.45□□□□□ -0.58
CCDC12-204ENST00000460035 XPO1O14980 1071 aaKnown RBP11.45□□□□□ -0.58
CCDC12-204ENST00000460035 CFHP08603 1231 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 SETSIPP0DME0 302 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 CYP11B1P15538 503 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 FIGNQ5HY92 759 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 TAF3Q5VWG9 929 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 TXNDC8Q6A555 127 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 GPRIN1Q7Z2K8 1008 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 TMEM150AQ86TG1 271 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 ZDHHC14Q8IZN3 488 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 GJD3Q8N144 294 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 MAB21L3Q8N8X9 362 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 ZSWIM3Q96MP5 696 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 NUP58Q9BVL2 599 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 EDEM3Q9BZQ6 932 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 TRIM5Q9C035 493 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 TASP1Q9H6P5 420 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 TRPC7Q9HCX4 862 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 ST7Q9NRC1 585 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 GDE1Q9NZC3 331 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 EPS15L1Q9UBC2 864 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 MYO6Q9UM54 1294 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 MIA3Q5JRA6 1907 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 TICRRQ7Z2Z1 1910 aa11.45□□□□□ -0.58
CCDC12-204ENST00000460035 ZNF840PA6NDX5 716 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 SOBPA7XYQ1 873 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 PIK3R2O00459 728 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 USP17L7P0C7H9 530 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 CCDC172P0C7W6 258 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 LCP1P13796 627 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 PLA2G4AP47712 749 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 PPP3CCP48454 512 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 PDE6CP51160 858 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 TKTL1P51854 596 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 KIF11P52732 1056 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 STXBP5Q5T5C0 1151 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 PMF1Q6P1K2 205 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 SARM1Q6SZW1 724 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 MON1AQ86VX9 555 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 PASD1Q8IV76 773 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 PDZD8Q8NEN9 1154 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 ZSCAN18Q8TBC5 510 aaPredicted RBP11.44□□□□□ -0.58
CCDC12-204ENST00000460035 SLC35F5Q8WV83 523 aa11.44□□□□□ -0.58
CCDC12-204ENST00000460035 OVCA2Q8WZ82 227 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms