RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 FBXO44Q9H4M3 255 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 APOBEC3GQ9HC16 384 aaKnown RBP18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.58■□□□□ 0.56not detected■□□□□ 10.5
SCARNA2-201ENST00000458748 KRT82Q9NSB4 513 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 KIAA1468Q9P260 1216 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 R4GN57 208 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 PPP1R3GB7ZBB8 358 aa18.57■□□□□ 0.56
SCARNA2-201ENST00000458748 CILPO75339 1184 aa18.57■□□□□ 0.56
SCARNA2-201ENST00000458748 ABL1P00519 1130 aa18.57■□□□□ 0.56
SCARNA2-201ENST00000458748 SP9P0CG40 484 aa18.57■□□□□ 0.56
SCARNA2-201ENST00000458748 USP46P62068 366 aa18.57■□□□□ 0.56
SCARNA2-201ENST00000458748 IFRD2Q12894 506 aaPredicted RBP18.57■□□□□ 0.56
SCARNA2-201ENST00000458748 TAF10Q12962 218 aa18.57■□□□□ 0.56
SCARNA2-201ENST00000458748 LRRC32Q14392 662 aa18.57■□□□□ 0.56
SCARNA2-201ENST00000458748 PPP2R5DQ14738 602 aa18.57■□□□□ 0.56
SCARNA2-201ENST00000458748 FUKQ8N0W3 1084 aa18.57■□□□□ 0.56
SCARNA2-201ENST00000458748 ELMO3Q96BJ8 720 aa18.57■□□□□ 0.56
SCARNA2-201ENST00000458748 FAM83CQ9BQN1 747 aa18.57■□□□□ 0.56
SCARNA2-201ENST00000458748 NDRG2Q9UN36 371 aaKnown RBP18.57■□□□□ 0.56
SCARNA2-201ENST00000458748 CTNND2Q9UQB3 1225 aa18.57■□□□□ 0.56
SCARNA2-201ENST00000458748 COQ4Q9Y3A0 265 aa18.57■□□□□ 0.56
SCARNA2-201ENST00000458748 ZNF840PA6NDX5 716 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 SPECC1L-ADORA2AF8WAN1 911 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 CCDC130P13994 396 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 CD44P16070 742 aaKnown RBP18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 TBXAS1P24557 533 aaPredicted RBP18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 CTHP32929 405 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 SLC8A3P57103 927 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 MTF1Q14872 753 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 CAMK4Q16566 473 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 TTI2Q6NXR4 508 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 DDX42Q86XP3 938 aaKnown RBP eCLIP18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 MAML2Q8IZL2 1156 aaPredicted RBP18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 KIAA1958Q8N8K9 716 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 ARL14EPQ8N8R7 260 aaPredicted RBP18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 SLC35C1Q96A29 364 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 CYFIP2Q96F07 1278 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 ZFYVE19Q96K21 471 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 KCNK16Q96T55 309 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 HNRNPABQ99729 332 aaKnown RBP18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 CHRDQ9H2X0 955 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 CSNK1G1Q9HCP0 422 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 GKN1Q9NS71 199 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 FAM49BQ9NUQ9 324 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 HMGXB4Q9UGU5 601 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 ARHGAP26Q9UNA1 814 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 CCL26Q9Y258 94 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 CFAP54Q96N23 3096 aa18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 HELZP42694 1942 aaKnown RBP18.56■□□□□ 0.56
SCARNA2-201ENST00000458748 GVINP1Q7Z2Y8 2422 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 C2orf78A6NCI8 922 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 P4HA2O15460 535 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 CCDC192P0DO97 292 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 TCF3P15923 654 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 ADORA2BP29275 332 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 IFNAR2P48551 515 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 SLC5A3P53794 718 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 CACNA2D1P54289 1103 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 NR1H3Q13133 447 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 ORC1Q13415 861 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 RUNX3Q13761 415 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 CBWD6Q4V339 395 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 CBWD3Q5JTY5 395 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 CBWD5Q5RIA9 395 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 PAQR9Q6ZVX9 377 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 CPA6Q8N4T0 437 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 C12orf29Q8N999 325 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 SEMA4DQ92854 862 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 HEXIM2Q96MH2 286 aaKnown RBP18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 GBP4Q96PP9 640 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 CYP2S1Q96SQ9 504 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 LMAN1LQ9HAT1 526 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 PNPLA8Q9NP80 782 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 CISHQ9NSE2 258 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 DUS2Q9NX74 493 aaKnown RBP18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 GTSE1Q9NYZ3 720 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 GCNT4Q9P109 453 aa18.55■□□□□ 0.56
SCARNA2-201ENST00000458748 MYO15AQ9UKN7 3530 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 VPS13AQ96RL7 3174 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 PMM2O15305 246 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 CHRNB1P11230 501 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 BMP6P22004 513 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 FMO5P49326 533 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 TUBP50607 506 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 MAP3K7CLP57077 242 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 SLC7A9P82251 487 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 DGKKQ5KSL6 1271 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 MLKLQ8NB16 471 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 TTC16Q8NEE8 873 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 OSCP1Q8WVF1 389 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 ATP2A3Q93084 1043 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 TMEM176AQ96HP8 235 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 DUSP9Q99956 384 aaKnown RBP18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 NACA2Q9H009 215 aa18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 PRMT8Q9NR22 394 aaPredicted RBP18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 EP300Q09472 2414 aaPredicted RBP18.54■□□□□ 0.56
SCARNA2-201ENST00000458748 MYH10P35580 1976 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 GOLGA6L22H0YM25 854 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 SLC9A3R1O14745 358 aaPredicted RBP18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 TNK2Q07912 1038 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms