RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 PDE4DIPQ5VU43 2346 aa14.2□□□□□ -0.14
TOP3B-213ENST00000457179 PDLIM1O00151 329 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 P4HA2O15460 535 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 TTC4O95801 387 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 HNRNPCP07910 306 aaKnown RBP eCLIP14.19□□□□□ -0.142e-10■□□□□ 9.8
TOP3B-213ENST00000457179 IQCF3P0C7M6 154 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 ARL2P36404 184 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 KRT17Q04695 432 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 HP1BP3Q5SSJ5 553 aaPredicted RBP14.19□□□□□ -0.14
TOP3B-213ENST00000457179 KAZNQ674X7 775 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 ST6GALNAC4Q9H4F1 302 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 GTF3C4Q9UKN8 822 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 DIS3Q9Y2L1 958 aaKnown RBP14.19□□□□□ -0.14
TOP3B-213ENST00000457179 CCDC160A6NGH7 325 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 OR6B1O95007 311 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 TGFB3P10600 412 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 CYP2B6P20813 491 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 AMPD1P23109 780 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 ICAM3P32942 547 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 LSAMPQ13449 338 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 C12orf56Q8IXR9 622 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 C10orf82Q8WW14 230 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 MFSD14AQ96MC6 490 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 YIPF2Q9BWQ6 316 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 WNT8AQ9H1J5 351 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 GBA2Q9HCG7 927 aaPredicted RBP14.19□□□□□ -0.14
TOP3B-213ENST00000457179 NMRK2Q9NPI5 230 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 SETD4Q9NVD3 440 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 ARL8BQ9NVJ2 186 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 PCYOX1Q9UHG3 505 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 ZNF510Q9Y2H8 683 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 HES2Q9Y543 173 aa14.19□□□□□ -0.14
TOP3B-213ENST00000457179 POC1B-GALNT4F8VUJ3 575 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 PI4K2BG5E9Z4 385 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 USP1O94782 785 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 GARTP22102 1010 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 GNA15P30679 374 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 NSFP46459 744 aaKnown RBP14.18□□□□□ -0.14
TOP3B-213ENST00000457179 ZBTB16Q05516 673 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 ACAD10Q6JQN1 1059 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 CLNKQ7Z7G1 428 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 SMC6Q96SB8 1091 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 MRPL4Q9BYD3 311 aaKnown RBP14.18□□□□□ -0.14
TOP3B-213ENST00000457179 SYNCQ9H7C4 482 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 GRID1Q9ULK0 1009 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 MAFO75444 373 aaPredicted RBP14.18□□□□□ -0.14
TOP3B-213ENST00000457179 ZNF189O75820 626 aaPredicted RBP14.18□□□□□ -0.14
TOP3B-213ENST00000457179 VNN1O95497 513 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 KRT15P19012 456 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 EDNRBP24530 442 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 GPC3P51654 580 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 CCNA1P78396 465 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 MAP7Q14244 749 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 DDX1Q92499 740 aaKnown RBP14.18□□□□□ -0.14
TOP3B-213ENST00000457179 KCNH4Q9UQ05 1017 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 R3HDM2Q9Y2K5 976 aaKnown RBP14.18□□□□□ -0.14
TOP3B-213ENST00000457179 COMMD3-BMI1R4GMX3 469 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 A0A0B4J269 797 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.18□□□□□ -0.14
TOP3B-213ENST00000457179 GSC2O15499 205 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 CCDC22O60826 627 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 ATG7O95352 703 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 GZMAP12544 262 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 CA4P22748 312 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 CETN2P41208 172 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 GLRA4Q5JXX5 417 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 ATF7IP2Q5U623 682 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 TAB3Q8N5C8 712 aaPredicted RBP14.18□□□□□ -0.14
TOP3B-213ENST00000457179 HAUS1Q96CS2 278 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 PRR11Q96HE9 360 aaPredicted RBP14.18□□□□□ -0.14
TOP3B-213ENST00000457179 FAM161BQ96MY7 647 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 BTBD10Q9BSF8 475 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 SMARCAD1Q9H4L7 1026 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 RMI1Q9H9A7 625 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.18□□□□□ -0.14
TOP3B-213ENST00000457179 NINJ2Q9NZG7 142 aa14.18□□□□□ -0.14
TOP3B-213ENST00000457179 DOCK1Q14185 1865 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 H3BRB1 525 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 CDH16O75309 829 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 TOM1L1O75674 476 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 PENKP01210 267 aaPredicted RBP14.17□□□□□ -0.14
TOP3B-213ENST00000457179 LGALS2P05162 132 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 FUT4P22083 530 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 CDK7P50613 346 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 ITGA8P53708 1063 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 SPARCL1Q14515 664 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 ZACNQ401N2 412 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 ATP13A4Q4VNC1 1196 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 MARK2Q7KZI7 788 aaKnown RBP14.17□□□□□ -0.14
TOP3B-213ENST00000457179 ST13P4Q8IZP2 240 aaPredicted RBP14.17□□□□□ -0.14
TOP3B-213ENST00000457179 C2orf69Q8N8R5 385 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 PTPN18Q99952 460 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 MROH8Q9H579 483 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 TUT1Q9H6E5 874 aaKnown RBP14.17□□□□□ -0.14
TOP3B-213ENST00000457179 ALG13Q9NP73 1137 aaKnown RBP14.17□□□□□ -0.14
TOP3B-213ENST00000457179 ERAP1Q9NZ08 941 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 BRCA1P38398 1863 aaKnown RBP14.17□□□□□ -0.14
TOP3B-213ENST00000457179 GOLGA8SH3BPF8 625 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 MSCO60682 206 aa14.17□□□□□ -0.14
TOP3B-213ENST00000457179 EDF1O60869 148 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms