RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 TSPY2A6NKD2 308 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 FANCGO15287 622 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 KLK10O43240 276 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 HBP1O60381 514 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 DIAPH2O60879 1101 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 GNAI2P04899 355 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 ADH5P11766 374 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 PRF1P14222 555 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 GJA1P17302 382 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 GARTP22102 1010 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 RACK1P63244 317 aaKnown RBP5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 ZNF33AQ06730 810 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 SPIRE1Q08AE8 756 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 RAD51AP2Q09MP3 1159 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 FBXO43Q4G163 708 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 ZNF484Q5JVG2 852 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 GPATCH4Q5T3I0 446 aaKnown RBP5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 FBXL19Q6PCT2 694 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 DEFB119Q8N690 84 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 KCT2Q8NC54 265 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 GSTCDQ8NEC7 633 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 GAL3ST3Q96A11 431 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 ELMO3Q96BJ8 720 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 MTMR8Q96EF0 704 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 HPS4Q9NQG7 708 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 ADAMTS1Q9UHI8 967 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 TBX20Q9UMR3 447 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 PCDHB2Q9Y5E7 798 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 WNT6Q9Y6F9 365 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 MEGF8Q7Z7M0 2845 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 PHLPP2Q6ZVD8 1323 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 CEP192Q8TEP8 1941 aa5.89□□□□□ -1.47
SBDSP1-204ENST00000453858 GCOM1H8Y6P7 765 aaPredicted RBP5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 TMPRSS2O15393 492 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 FLRT2O43155 660 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 BCAR3O75815 825 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 ALX3O95076 343 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 C8BP07358 591 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 POLR2MP0CAP2 368 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 CHRNA4P43681 627 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 CD97P48960 835 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 SLC26A2P50443 739 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 GPC3P51654 580 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 USP11P51784 963 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 PPARAQ07869 468 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 TESK1Q15569 626 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 CRY1Q16526 586 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 PLEKHG6Q3KR16 790 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 ZNF394Q53GI3 561 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 AACSQ86V21 672 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 DHX40Q8IX18 779 aaKnown RBP5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 YAF2Q8IY57 180 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 AGGF1Q8N302 714 aaeCLIP5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 RNF214Q8ND24 703 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 URGCPQ8TCY9 931 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 USP33Q8TEY7 942 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 WDR89Q96FK6 387 aaPredicted RBP5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 ZNF419Q96HQ0 510 aaPredicted RBP5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 ZNF668Q96K58 619 aaPredicted RBP5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 ZNF578Q96N58 590 aaPredicted RBP5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 FAM193BQ96PV7 902 aaPredicted RBP5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 COLEC11Q9BWP8 271 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 TM7SF3Q9NS93 570 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 ADAM28Q9UKQ2 775 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 PCDHGA1Q9Y5H4 931 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 COL1A2P08123 1366 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 PCSK5Q92824 1860 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 MYO16Q9Y6X6 1858 aa5.88□□□□□ -1.47
SBDSP1-204ENST00000453858 MYH7P12883 1935 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 ARL5CA6NH57 179 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 GFRA2O00451 464 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 FOXP2O15409 715 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 DHX15O43143 795 aaKnown RBP5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 ORC4O43929 436 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 ABLIM3O94929 683 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 CLDN1O95832 211 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 F13A1P00488 732 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 LRG1P02750 347 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 FAM87AP0C7U9 286 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 OR1D2P34982 312 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 CASRP41180 1078 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 ASPAP45381 313 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 TDO2P48775 406 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 CLCN3P51790 818 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 OXCT1P55809 520 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 ACTR2P61160 394 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 FAM160A1Q05DH4 1040 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 OS9Q13438 667 aaPredicted RBP5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 SEPT6Q14141 434 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 TEAD2Q15562 447 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 PSMD5Q16401 504 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 SKIDA1Q1XH10 827 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 UBXN11Q5T124 520 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 TSHZ3Q63HK5 1081 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 TWF2Q6IBS0 349 aaKnown RBP5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 BNC2Q6ZN30 1099 aaPredicted RBP5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 DYMQ7RTS9 669 aa5.87□□□□□ -1.47
SBDSP1-204ENST00000453858 REXO1Q8N1G1 1221 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms