RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 NFIL3Q16649 462 aa13.7□□□□□ -0.22
CHD3-206ENST00000452447 WDR44Q5JSH3 913 aa13.7□□□□□ -0.22
CHD3-206ENST00000452447 WNT6Q9Y6F9 365 aa13.7□□□□□ -0.22
CHD3-206ENST00000452447 DNAH14Q0VDD8 3507 aa13.69□□□□□ -0.22
CHD3-206ENST00000452447 AKAP3O75969 853 aa13.69□□□□□ -0.22
CHD3-206ENST00000452447 PAPSS2O95340 614 aaPredicted RBP13.69□□□□□ -0.22
CHD3-206ENST00000452447 ASS1P00966 412 aaKnown RBP13.69□□□□□ -0.22
CHD3-206ENST00000452447 DRD1P21728 446 aa13.69□□□□□ -0.22
CHD3-206ENST00000452447 YWHAQP27348 245 aa13.69□□□□□ -0.22
CHD3-206ENST00000452447 PSMC2P35998 433 aaKnown RBP13.69□□□□□ -0.22
CHD3-206ENST00000452447 ACOT1Q86TX2 421 aa13.69□□□□□ -0.22
CHD3-206ENST00000452447 FAM35AQ86V20 835 aa13.69□□□□□ -0.22
CHD3-206ENST00000452447 FAM186BQ8IYM0 893 aa13.69□□□□□ -0.22
CHD3-206ENST00000452447 CCDC150Q8NCX0 1101 aa13.69□□□□□ -0.22
CHD3-206ENST00000452447 SMARCD1Q96GM5 515 aa13.69□□□□□ -0.22
CHD3-206ENST00000452447 KCNK16Q96T55 309 aa13.69□□□□□ -0.22
CHD3-206ENST00000452447 P2RY13Q9BPV8 354 aa13.69□□□□□ -0.22
CHD3-206ENST00000452447 SDCBP2Q9H190 292 aa13.69□□□□□ -0.22
CHD3-206ENST00000452447 DMAP1Q9NPF5 467 aaPredicted RBP13.69□□□□□ -0.22
CHD3-206ENST00000452447 TMEM30AQ9NV96 361 aa13.69□□□□□ -0.22
CHD3-206ENST00000452447 LEFTY2O00292 366 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 ATG13O75143 517 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 NFATC1O95644 943 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 HLA-DRAP01903 254 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 TCF3P15923 654 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 ID4P47928 161 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 GCLMP48507 274 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 GALK1P51570 392 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 NDST1P52848 882 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 NUCB2P80303 420 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 EML3Q32P44 896 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 HEATR6Q6AI08 1181 aaKnown RBP13.68□□□□□ -0.22
CHD3-206ENST00000452447 SPOPLQ6IQ16 392 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 FSTL4Q6MZW2 842 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 PRR23BQ6ZRT6 265 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 UNC93AQ86WB7 457 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 PDZD8Q8NEN9 1154 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 FBXO32Q969P5 355 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 RNF38Q9H0F5 515 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 MMRN2Q9H8L6 949 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.68□□□□□ -0.224e-7■■■■■ 128.6
CHD3-206ENST00000452447 RMND1Q9NWS8 449 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 GMEB2Q9UKD1 530 aa13.68□□□□□ -0.22
CHD3-206ENST00000452447 CHURC1-FNTBB4DL54 471 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 K7ESF4 209 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 AP1G2O75843 785 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 OAS1P00973 400 aaKnown RBP13.67□□□□□ -0.22
CHD3-206ENST00000452447 EGFP01133 1207 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 TRIM49P0CI25 452 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 TRIM49CP0CI26 452 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 CNR2P34972 360 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 FNTBP49356 437 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 SLC7A9P82251 487 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 ENPEPQ07075 957 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 FBXO43Q4G163 708 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 C1orf220Q5T0J3 134 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 LONP2Q86WA8 852 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 FUKQ8N0W3 1084 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 GPR161Q8N6U8 529 aaKnown RBP13.67□□□□□ -0.22
CHD3-206ENST00000452447 OVCA2Q8WZ82 227 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 CD101Q93033 1021 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 CHFRQ96EP1 664 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 DNAI2Q9GZS0 605 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 LINC00597Q9H2U6 94 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 FBRSL1Q9HCM7 1045 aaKnown RBP13.67□□□□□ -0.22
CHD3-206ENST00000452447 KRT82Q9NSB4 513 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 SMPD4Q9NXE4 827 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 CHORDC1Q9UHD1 332 aaPredicted RBP13.67□□□□□ -0.22
CHD3-206ENST00000452447 CPQQ9Y646 472 aa13.67□□□□□ -0.22
CHD3-206ENST00000452447 MYO18AQ92614 2054 aaKnown RBP13.67□□□□□ -0.22
CHD3-206ENST00000452447 SLC9A3R1O14745 358 aaPredicted RBP13.66□□□□□ -0.22
CHD3-206ENST00000452447 RNF40O75150 1001 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 MBL2P11226 248 aaPredicted RBP13.66□□□□□ -0.22
CHD3-206ENST00000452447 CCDC130P13994 396 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 ASPAP45381 313 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 SLC5A3P53794 718 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 ZXDBP98169 803 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 PPP3CAQ08209 521 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 ORC1Q13415 861 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 PNOCQ13519 176 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 SIM2Q14190 667 aaPredicted RBP13.66□□□□□ -0.22
CHD3-206ENST00000452447 EDRF1Q3B7T1 1238 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 PAQR9Q6ZVX9 377 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 DDX42Q86XP3 938 aaKnown RBP eCLIP13.66□□□□□ -0.22
CHD3-206ENST00000452447 SMYD4Q8IYR2 804 aaPredicted RBP13.66□□□□□ -0.22
CHD3-206ENST00000452447 CRYBG2Q8N1P7 616 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 SCAMP5Q8TAC9 235 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 SLC2A14Q8TDB8 520 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 TAS1R2Q8TE23 839 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 FAM49BQ9NUQ9 324 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 C2orf42Q9NWW7 574 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 SLC8A2Q9UPR5 921 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 SPTBN2O15020 2390 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 CETN3O15182 167 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 SMC2O95347 1197 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 OLFM2O95897 454 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 EPB41P11171 864 aaKnown RBP13.66□□□□□ -0.22
CHD3-206ENST00000452447 HOXA6P31267 233 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 GTF2H1P32780 548 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 DMWDQ09019 674 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms