RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ARHGAP26Q9UNA1 814 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 CNTN6Q9UQ52 1028 aa17.07■□□□□ 0.32
SCAMP4-205ENST00000452128 PIEZO1Q92508 2521 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 ANAPC1Q9H1A4 1944 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 ATP8B3O60423 1300 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 OTOL1A6NHN0 477 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 RNF225M0QZC1 329 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 GALR2O43603 387 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 FGFR1OPO95684 399 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 CD72P21854 359 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 MAP3K7CLP57077 242 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 SLC7A9P82251 487 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 ZNF77Q15935 545 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 ARHGAP29Q52LW3 1261 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 ZNF394Q53GI3 561 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 CCDC105Q8IYK2 499 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 PJA1Q8NG27 643 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 ZFYVE19Q96K21 471 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 KREMEN1Q96MU8 473 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 ZSWIM1Q9BR11 485 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 MED10Q9BTT4 135 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 MFSD1Q9H3U5 465 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 KIF9Q9HAQ2 790 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 LTB4R2Q9NPC1 389 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 HPS4Q9NQG7 708 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 GKN1Q9NS71 199 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 TRPM5Q9NZQ8 1165 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 CHORDC1Q9UHD1 332 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 SIT1Q9Y3P8 196 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 USP3Q9Y6I4 520 aa17.06■□□□□ 0.32
SCAMP4-205ENST00000452128 OBSL1O75147 1896 aa17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 AFPP02771 609 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 USP17L7P0C7H9 530 aa17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 FAM200BP0CF97 657 aa17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 HDCP19113 662 aa17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 TBXAS1P24557 533 aaPredicted RBP17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 TARSP26639 723 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 AVPR1AP37288 418 aa17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 KIF11P52732 1056 aa17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 ZNF132P52740 706 aa17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 LRMPQ12912 555 aa17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 USP4Q13107 963 aa17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 PKDCCQ504Y2 493 aa17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 ARHGEF19Q8IW93 802 aa17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 KIAA1958Q8N8K9 716 aa17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 ZFRQ96KR1 1074 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 CNOT6LQ96LI5 555 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 HEXIM2Q96MH2 286 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 PRRX2Q99811 253 aa17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 THAP9Q9H5L6 903 aa17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 NUP210Q8TEM1 1887 aaPredicted RBP17.05■□□□□ 0.32
SCAMP4-205ENST00000452128 TRAV19A0A0A6YYK7 116 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 FAM170BA6NMN3 283 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 DPYSL4O14531 572 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 DCNP07585 359 aaKnown RBP17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 CCDC192P0DO97 292 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 ADORA2BP29275 332 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 PLCB2Q00722 1185 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 GCNT1Q02742 428 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 TNK2Q07912 1038 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 RAB41Q5JT25 222 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 TPRG1Q6ZUI0 275 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 TTC30AQ86WT1 665 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 ANKRD52Q8NB46 1076 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 DTWD2Q8NBA8 298 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 TFAP2BQ92481 460 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 NT5C1BQ96P26 610 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 NELL2Q99435 816 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 OSER1Q9NX31 292 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 GTSE1Q9NYZ3 720 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 SCML2Q9UQR0 700 aa17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 ZNF638Q14966 1978 aaKnown RBP17.04■□□□□ 0.32
SCAMP4-205ENST00000452128 KIF26AQ9ULI4 1882 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 GABBR2O75899 941 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 TUBP50607 506 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 MIIPQ5JXC2 388 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 TXNDC11Q6PKC3 985 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 ZNF852Q6ZMS4 543 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 MAMSTRQ6ZN01 415 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 SCD5Q86SK9 330 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 MAML2Q8IZL2 1156 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 ZNF276Q8N554 614 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 PDZD8Q8NEN9 1154 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 SH3RF2Q8TEC5 729 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 FBXO32Q969P5 355 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 SLITRK1Q96PX8 696 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 INTS2Q9H0H0 1204 aaKnown RBP17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 C8orf33Q9H7E9 229 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 TRPC7Q9HCX4 862 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 GMIPQ9P107 970 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 KIAA1257Q9ULG3 409 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 PIAS3Q9Y6X2 628 aa17.03■□□□□ 0.32
SCAMP4-205ENST00000452128 CACNA1IQ9P0X4 2223 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 GTPBP10A4D1E9 387 aaKnown RBP17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 O00370 1275 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 MAN2B1O00754 1011 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 COCHO43405 550 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 GREM1O60565 184 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 CLSTN1O94985 981 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms