RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 C3orf20Q8ND61 904 aa5.34□□□□□ -1.55
GTF3C3-207ENST00000451088 NSUN7Q8NE18 718 aaKnown RBP5.34□□□□□ -1.55
GTF3C3-207ENST00000451088 SLC30A5Q8TAD4 765 aa5.34□□□□□ -1.55
GTF3C3-207ENST00000451088 LPIN2Q92539 896 aa5.34□□□□□ -1.55
GTF3C3-207ENST00000451088 SNX19Q92543 992 aa5.34□□□□□ -1.55
GTF3C3-207ENST00000451088 BRINP2Q9C0B6 783 aa5.34□□□□□ -1.55
GTF3C3-207ENST00000451088 BRD9Q9H8M2 597 aa5.34□□□□□ -1.55
GTF3C3-207ENST00000451088 RSAD1Q9HA92 442 aa5.34□□□□□ -1.55
GTF3C3-207ENST00000451088 SLC17A6Q9P2U8 582 aa5.34□□□□□ -1.55
GTF3C3-207ENST00000451088 MEGF6O75095 1541 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 AFDNP55196 1824 aaKnown RBP5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 WDR27A2RRH5 827 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 CCDC151A5D8V7 595 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 TOR1BO14657 336 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 SLC16A6O15403 523 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 PROP1O75360 226 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 ARIH2O95376 493 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 PDCP20941 246 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 PRDX5P30044 214 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 MAPK10P53779 464 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 TCF15Q12870 199 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 PGBD1Q96JS3 809 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 TRIB1Q96RU8 372 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 SMAD5Q99717 465 aaKnown RBP5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 TIMP4Q99727 224 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 HEPHQ9BQS7 1158 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 GPR35Q9HC97 309 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 KIAA1586Q9HCI6 787 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 HOMER2Q9NSB8 354 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 GNL3LQ9NVN8 582 aaKnown RBP5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 CFAP97Q9P2B7 532 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 LTBP1Q14766 1721 aa5.33□□□□□ -1.56
GTF3C3-207ENST00000451088 LRRC14BA6NHZ5 514 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 PPM1GO15355 546 aaPredicted RBP5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 CHEK2O96017 543 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 C1RP00736 705 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 GJB1P08034 283 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 HSP90AB1P08238 724 aaKnown RBP5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 GNAI3P08754 354 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 POU2F2P09086 479 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 GRIA3P42263 894 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 HK3P52790 923 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 GNAI1P63096 354 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 NOGQ13253 232 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 HABP2Q14520 560 aaPredicted RBP5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 BRDTQ58F21 947 aaPredicted RBP5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 HSP90AB2PQ58FF8 381 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 THEMIS2Q5TEJ8 643 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 KAZNQ674X7 775 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 USP45Q70EL2 814 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 CPA6Q8N4T0 437 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 MYCBPAPQ8TBZ2 947 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 ZNF622Q969S3 477 aaKnown RBP eCLIP5.32□□□□□ -1.564e-7■■■□□ 18.3
GTF3C3-207ENST00000451088 SMOQ99835 787 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 PCGF6Q9BYE7 350 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 KLK15Q9H2R5 256 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 ADARB2Q9NS39 739 aaKnown RBP5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 ETAA1Q9NY74 926 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 TMOD3Q9NYL9 352 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 ENTPD2Q9Y5L3 495 aa5.32□□□□□ -1.56
GTF3C3-207ENST00000451088 THSD7BQ9C0I4 1608 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 USP42Q9H9J4 1324 aaKnown RBP5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 DTNBO60941 627 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 SNUPNO95149 360 aaKnown RBP5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 SERPINB2P05120 415 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 PPP3CBP16298 524 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 ZNF37AP17032 561 aaPredicted RBP5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 WT1P19544 449 aaPredicted RBP5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 SMARCA1P28370 1054 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 NPTX2P47972 431 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 PIK3CGP48736 1102 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 ITIH3Q06033 890 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 KIF22Q14807 665 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 PREPLQ4J6C6 727 aaPredicted RBP5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 TSHZ1Q6ZSZ6 1077 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 GRASPQ7Z6J2 395 aaPredicted RBP5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 CTU1Q7Z7A3 348 aaKnown RBP5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 PEG10Q86TG7 708 aaKnown RBP5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 TFAP2BQ92481 460 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 FBXL20Q96IG2 436 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 UROC1Q96N76 676 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 OSBPL9Q96SU4 736 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 POLR3GLQ9BT43 218 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 SPATA5L1Q9BVQ7 753 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 TAOK3Q9H2K8 898 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 WDCPQ9H6R7 721 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 TCF7L1Q9HCS4 588 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 ARPP21Q9UBL0 812 aaPredicted RBP5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 ZDHHC8Q9ULC8 765 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 PCDHA3Q9Y5H8 950 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 TNFRSF18Q9Y5U5 241 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 SLX4Q8IY92 1834 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 ADAMTSL1Q8N6G6 1762 aa5.31□□□□□ -1.56
GTF3C3-207ENST00000451088 SZT2Q5T011 3432 aa5.3□□□□□ -1.56
GTF3C3-207ENST00000451088 CACNA1SQ13698 1873 aa5.3□□□□□ -1.56
GTF3C3-207ENST00000451088 ARHGEF17Q96PE2 2063 aaPredicted RBP5.3□□□□□ -1.56
GTF3C3-207ENST00000451088 LRRC3CA6NJW4 275 aa5.3□□□□□ -1.56
GTF3C3-207ENST00000451088 ZNF785A8K8V0 405 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms