RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SLC35F5Q8WV83 523 aa13.76□□□□□ -0.21
VPS33A-202ENST00000451053 BAG1Q99933 345 aaPredicted RBP13.76□□□□□ -0.21
VPS33A-202ENST00000451053 AIPL1Q9NZN9 384 aa13.76□□□□□ -0.21
VPS33A-202ENST00000451053 THEGQ9P2T0 379 aa13.76□□□□□ -0.21
VPS33A-202ENST00000451053 CYTH4Q9UIA0 394 aa13.76□□□□□ -0.21
VPS33A-202ENST00000451053 PCDHGC3Q9UN70 934 aa13.76□□□□□ -0.21
VPS33A-202ENST00000451053 BZW2Q9Y6E2 419 aaKnown RBP13.76□□□□□ -0.21
VPS33A-202ENST00000451053 REV3LO60673 3130 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 CLUHO75153 1309 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 GREB1Q4ZG55 1949 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 MYL4P12829 197 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 FECHP22830 423 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 CCR2P41597 374 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 MTHFRP42898 656 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 GPD2P43304 727 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 PLA2G4AP47712 749 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 RGS7P49802 495 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 EPHA5P54756 1037 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 SLC8A3P57103 927 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 FMO1Q01740 532 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 CDR2Q01850 454 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 TAF12Q16514 161 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 MEA1Q16626 185 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 SLC5A9Q2M3M2 681 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 PABPC1LQ4VXU2 614 aaKnown RBP13.75□□□□□ -0.21
VPS33A-202ENST00000451053 ATAT1Q5SQI0 421 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 PMF1Q6P1K2 205 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 TMTC1Q8IUR5 882 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 NUP93Q8N1F7 819 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 WDTC1Q8N5D0 677 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 TCEAL4Q96EI5 215 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 CEP295NLQ96MC4 621 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 RIPOR3Q96MK2 946 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 TTLL2Q9BWV7 592 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 UBXN6Q9BZV1 441 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 POMKQ9H5K3 350 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 IL21Q9HBE4 155 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 WDR6Q9NNW5 1121 aaKnown RBP13.75□□□□□ -0.21
VPS33A-202ENST00000451053 PNPLA8Q9NP80 782 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 ASAH2Q9NR71 780 aa13.75□□□□□ -0.21
VPS33A-202ENST00000451053 NOTCH4Q99466 2003 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 MYH10P35580 1976 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 FAM170AA1A519 330 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 TADA3O75528 432 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 GABBR2O75899 941 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 RTN3O95197 1032 aaPredicted RBP13.74□□□□□ -0.21
VPS33A-202ENST00000451053 SERPING1P05155 500 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 SKILP12757 684 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 GJA1P17302 382 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 PRKCIP41743 596 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 CBX2Q14781 532 aaPredicted RBP13.74□□□□□ -0.21
VPS33A-202ENST00000451053 RAB41Q5JT25 222 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 PRSS36Q5K4E3 855 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 PTCRAQ6ISU1 281 aaPredicted RBP13.74□□□□□ -0.21
VPS33A-202ENST00000451053 GAREM2Q75VX8 874 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 PDZD4Q76G19 769 aaPredicted RBP13.74□□□□□ -0.21
VPS33A-202ENST00000451053 TMEM150AQ86TG1 271 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 ZNF677Q86XU0 584 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 C1orf131Q8NDD1 294 aaKnown RBP13.74□□□□□ -0.21
VPS33A-202ENST00000451053 OLIG1Q8TAK6 271 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 ITFG1Q8TB96 612 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 SHKBP1Q8TBC3 707 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 TRMT2BQ96GJ1 504 aaKnown RBP13.74□□□□□ -0.21
VPS33A-202ENST00000451053 MYRFLQ96LU7 910 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 PCDHB18PQ96TA0 734 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 SYT11Q9BT88 431 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 LHX5Q9H2C1 402 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 PDCL3Q9H2J4 239 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 IL37Q9NZH6 218 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 DOCK6Q96HP0 2047 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 BRWD1Q9NSI6 2320 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 DENND4AQ7Z401 1863 aa13.74□□□□□ -0.21
VPS33A-202ENST00000451053 PIK3R2O00459 728 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 ARHGAP6O43182 974 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 MOSPD3O75425 235 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 F11P03951 625 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 FSHRP23945 695 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 YWHAQP27348 245 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 GABRR2P28476 465 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 KCNQ1P51787 676 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 TKTL1P51854 596 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 KIF11P52732 1056 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 CCZ1BP86790 482 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 CCZ1P86791 482 aaPredicted RBP13.73□□□□□ -0.21
VPS33A-202ENST00000451053 KLHL30Q0D2K2 578 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 ADIGQ0VDE8 80 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 TAF10Q12962 218 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 PDCLQ13371 301 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 CYP4A22Q5TCH4 519 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 HGSNATQ68CP4 663 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 ZNF571Q7Z3V5 609 aaPredicted RBP13.73□□□□□ -0.21
VPS33A-202ENST00000451053 VPS36Q86VN1 386 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 ING5Q8WYH8 240 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 KCTD13Q8WZ19 329 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 FBXO32Q969P5 355 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 NECTIN4Q96NY8 510 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 AGPAT1Q99943 283 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 HAUS4Q9H6D7 363 aa13.73□□□□□ -0.21
VPS33A-202ENST00000451053 AVENQ9NQS1 362 aaPredicted RBP13.73□□□□□ -0.21
VPS33A-202ENST00000451053 SSU72P8A0A1W2PR75 194 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms