RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 MRPS31Q92665 395 aaKnown RBP15.19■□□□□ 0.02
COL3A1-203ENST00000450867 ZSWIM1Q9BR11 485 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 VPS16Q9H269 839 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 TSPAN16Q9UKR8 245 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 DUSP12Q9UNI6 340 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 SIK3Q9Y2K2 1263 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 TICRRQ7Z2Z1 1910 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 ZDBF2Q9HCK1 2354 aa15.19■□□□□ 0.02
COL3A1-203ENST00000450867 BECN2A8MW95 431 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 OLFM2O95897 454 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 ATP1A3P13637 1013 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 YWHAQP27348 245 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 BCAT1P54687 386 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 MAP3K7CLP57077 242 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 ZNF268Q14587 947 aaPredicted RBP15.18■□□□□ 0.02
COL3A1-203ENST00000450867 CNGA2Q16280 664 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 RAB41Q5JT25 222 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 KLHDC7AQ5VTJ3 777 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 TANGO2Q6ICL3 276 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 CMTM8Q8IZV2 173 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 TFAP2BQ92481 460 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 SLITRK1Q96PX8 696 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 ERGIC2Q96RQ1 377 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 SLC46A2Q9BY10 475 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 GANQ9H2C0 597 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 FBXO44Q9H4M3 255 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 ZFP14Q9HCL3 533 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 SLC2A4RGQ9NR83 387 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 TRPM5Q9NZQ8 1165 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 AJAP1Q9UKB5 411 aaPredicted RBP15.18■□□□□ 0.02
COL3A1-203ENST00000450867 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.18■□□□□ 0.02
COL3A1-203ENST00000450867 USP3Q9Y6I4 520 aa15.18■□□□□ 0.02
COL3A1-203ENST00000450867 F5P12259 2224 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 ZNF318Q5VUA4 2279 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 ZNF840PA6NDX5 716 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 XPO1O14980 1071 aaKnown RBP15.17■□□□□ 0.02
COL3A1-203ENST00000450867 SETSIPP0DME0 302 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 SRFP11831 508 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 UCHL3P15374 230 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 CD19P15391 556 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 KIF11P52732 1056 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 SIGLEC14Q08ET2 396 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 FCHO2Q0JRZ9 810 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 BST2Q10589 180 aaKnown RBP15.17■□□□□ 0.02
COL3A1-203ENST00000450867 TAF10Q12962 218 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 GOLGA7BQ2TAP0 167 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 FKBP15Q5T1M5 1219 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 GPRIN1Q7Z2K8 1008 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 ARID3BQ8IVW6 561 aaPredicted RBP15.17■□□□□ 0.02
COL3A1-203ENST00000450867 FAM71AQ8IYT1 594 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 SCAMP5Q8TAC9 235 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 DEPDC1BQ8WUY9 529 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 KXD1Q9BQD3 176 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 RPP25Q9BUL9 199 aaKnown RBP15.17■□□□□ 0.02
COL3A1-203ENST00000450867 SLITRK6Q9H5Y7 841 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 CBX8Q9HC52 389 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 DNAJC12Q9UKB3 198 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 SCML2Q9UQR0 700 aa15.17■□□□□ 0.02
COL3A1-203ENST00000450867 PES1O00541 588 aaKnown RBP15.16■□□□□ 0.02
COL3A1-203ENST00000450867 PRAMEF12O95522 483 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 OAS1P00973 400 aaKnown RBP15.16■□□□□ 0.02
COL3A1-203ENST00000450867 TCF3P15923 654 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 CDK11BP21127 795 aaKnown RBP15.16■□□□□ 0.02
COL3A1-203ENST00000450867 PLA2G4AP47712 749 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 TUBP50607 506 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 PDE6CP51160 858 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 PDE4CQ08493 712 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 TXNDC8Q6A555 127 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 VITQ6UXI7 678 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 TRIM67Q6ZTA4 783 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 CCDC186Q7Z3E2 898 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 MFSD6LQ8IWD5 586 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 SCML4Q8N228 414 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 ZNF276Q8N554 614 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 FBXO32Q969P5 355 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 RSPRY1Q96DX4 576 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 ASIC4Q96FT7 647 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 LSM14BQ9BX40 385 aaKnown RBP15.16■□□□□ 0.02
COL3A1-203ENST00000450867 PLA2G2FQ9BZM2 168 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 EPHX3Q9H6B9 360 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 KIF9Q9HAQ2 790 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 HESX1Q9UBX0 185 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 FHOD1Q9Y613 1164 aa15.16■□□□□ 0.02
COL3A1-203ENST00000450867 NARSO43776 548 aaKnown RBP15.15■□□□□ 0.02
COL3A1-203ENST00000450867 KRT5P13647 590 aa15.15■□□□□ 0.02
COL3A1-203ENST00000450867 PSMC3P17980 439 aa15.15■□□□□ 0.02
COL3A1-203ENST00000450867 BRD2P25440 801 aaKnown RBP15.15■□□□□ 0.02
COL3A1-203ENST00000450867 VIPR2P41587 438 aa15.15■□□□□ 0.02
COL3A1-203ENST00000450867 RPL34P49207 117 aaKnown RBP15.15■□□□□ 0.02
COL3A1-203ENST00000450867 SLC8A3P57103 927 aa15.15■□□□□ 0.02
COL3A1-203ENST00000450867 ARHGAP44Q17R89 818 aa15.15■□□□□ 0.02
COL3A1-203ENST00000450867 PIGZQ86VD9 579 aa15.15■□□□□ 0.02
COL3A1-203ENST00000450867 CELF5Q8N6W0 485 aaKnown RBP15.15■□□□□ 0.02
COL3A1-203ENST00000450867 KIAA1958Q8N8K9 716 aa15.15■□□□□ 0.02
COL3A1-203ENST00000450867 MAB21L3Q8N8X9 362 aa15.15■□□□□ 0.02
COL3A1-203ENST00000450867 SLC35F5Q8WV83 523 aa15.15■□□□□ 0.02
COL3A1-203ENST00000450867 KCTD13Q8WZ19 329 aa15.15■□□□□ 0.02
COL3A1-203ENST00000450867 STK33Q9BYT3 514 aa15.15■□□□□ 0.02
COL3A1-203ENST00000450867 SMOC2Q9H3U7 446 aa15.15■□□□□ 0.02
COL3A1-203ENST00000450867 C11orf16Q9NQ32 467 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms