RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 LRRC63Q05C16 580 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 STIM1Q13586 685 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 TMEM196Q5HYL7 178 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 C1orf220Q5T0J3 134 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 FOXR2Q6PJQ5 311 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 GPIHBP1Q8IV16 184 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 ARL14EPQ8N8R7 260 aaPredicted RBP17.02■□□□□ 0.32
SGCE-208ENST00000450385 RUBCNQ92622 972 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 CHAMP1Q96JM3 812 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 DPEP3Q9H4B8 488 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 SMYD3Q9H7B4 428 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 GDPD2Q9HCC8 539 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 TRPC7Q9HCX4 862 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 PNPLA8Q9NP80 782 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 R4GN57 208 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 COL4A3Q01955 1670 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 OTOGLQ3ZCN5 2332 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 CCDC163A0A0D9SF12 145 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 SLC16A3O15427 465 aaKnown RBP17.01■□□□□ 0.31
SGCE-208ENST00000450385 CLSTN1O94985 981 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 NFATC1O95644 943 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 OAS1P00973 400 aaKnown RBP17.01■□□□□ 0.31
SGCE-208ENST00000450385 TDGF1P13385 188 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 IFNAR2P48551 515 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 TNK2Q07912 1038 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 TAF10Q12962 218 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 CCDC142Q17RM4 750 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 SUMF1Q8NBK3 374 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 SMARCE1Q969G3 411 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 OTUB2Q96DC9 234 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 CYP2S1Q96SQ9 504 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 MED10Q9BTT4 135 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 NT5C1AQ9BXI3 368 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 ZNF518BQ9C0D4 1074 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 SMG9Q9H0W8 520 aaKnown RBP17.01■□□□□ 0.31
SGCE-208ENST00000450385 EPC1Q9H2F5 836 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 EBF3Q9H4W6 596 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 ECT2Q9H8V3 914 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 HPS4Q9NQG7 708 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 CIZ1Q9ULV3 898 aaPredicted RBP17.01■□□□□ 0.31
SGCE-208ENST00000450385 MAPK8IP1Q9UQF2 711 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 GVINP1Q7Z2Y8 2422 aa17.01■□□□□ 0.31
SGCE-208ENST00000450385 C2orf78A6NCI8 922 aa17■□□□□ 0.31
SGCE-208ENST00000450385 TNFRSF10BO14763 440 aa17■□□□□ 0.31
SGCE-208ENST00000450385 PRCPP42785 496 aa17■□□□□ 0.31
SGCE-208ENST00000450385 ASPAP45381 313 aa17■□□□□ 0.31
SGCE-208ENST00000450385 SOX9P48436 509 aa17■□□□□ 0.31
SGCE-208ENST00000450385 USP46P62068 366 aa17■□□□□ 0.31
SGCE-208ENST00000450385 PNOCQ13519 176 aa17■□□□□ 0.31
SGCE-208ENST00000450385 PON2Q15165 354 aa17■□□□□ 0.31
SGCE-208ENST00000450385 TXNDC11Q6PKC3 985 aa17■□□□□ 0.31
SGCE-208ENST00000450385 PAQR9Q6ZVX9 377 aa17■□□□□ 0.31
SGCE-208ENST00000450385 FAM35AQ86V20 835 aa17■□□□□ 0.31
SGCE-208ENST00000450385 ZC3H3Q8IXZ2 948 aaKnown RBP17■□□□□ 0.31
SGCE-208ENST00000450385 FUKQ8N0W3 1084 aa17■□□□□ 0.31
SGCE-208ENST00000450385 FBXL13Q8NEE6 735 aa17■□□□□ 0.31
SGCE-208ENST00000450385 SH3RF2Q8TEC5 729 aa17■□□□□ 0.31
SGCE-208ENST00000450385 SLC22A12Q96S37 553 aa17■□□□□ 0.31
SGCE-208ENST00000450385 HNRNPABQ99729 332 aaKnown RBP17■□□□□ 0.31
SGCE-208ENST00000450385 NIF3L1Q9GZT8 377 aa17■□□□□ 0.31
SGCE-208ENST00000450385 TBC1D14Q9P2M4 693 aa17■□□□□ 0.31
SGCE-208ENST00000450385 CHURC1-FNTBB4DL54 471 aa16.99■□□□□ 0.31
SGCE-208ENST00000450385 GJA4P35212 333 aa16.99■□□□□ 0.31
SGCE-208ENST00000450385 GCLMP48507 274 aa16.99■□□□□ 0.31
SGCE-208ENST00000450385 NDST1P52848 882 aa16.99■□□□□ 0.31
SGCE-208ENST00000450385 PPP3CAQ08209 521 aa16.99■□□□□ 0.31
SGCE-208ENST00000450385 EML3Q32P44 896 aa16.99■□□□□ 0.31
SGCE-208ENST00000450385 WDR44Q5JSH3 913 aa16.99■□□□□ 0.31
SGCE-208ENST00000450385 HECTD3Q5T447 861 aa16.99■□□□□ 0.31
SGCE-208ENST00000450385 ACOT1Q86TX2 421 aa16.99■□□□□ 0.31
SGCE-208ENST00000450385 ZNF276Q8N554 614 aa16.99■□□□□ 0.31
SGCE-208ENST00000450385 DHTKD1Q96HY7 919 aaPredicted RBP16.99■□□□□ 0.31
SGCE-208ENST00000450385 METTL14Q9HCE5 456 aaKnown RBP16.99■□□□□ 0.31
SGCE-208ENST00000450385 RAB20Q9NX57 234 aa16.99■□□□□ 0.31
SGCE-208ENST00000450385 COQ4Q9Y3A0 265 aa16.99■□□□□ 0.31
SGCE-208ENST00000450385 PCDHA5Q9Y5H7 936 aa16.99■□□□□ 0.31
SGCE-208ENST00000450385 E2F8A0AVK6 867 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 LEFTY2O00292 366 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 CLDN5O00501 218 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 PSMA7O14818 248 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 PMM2O15305 246 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 AP1G2O75843 785 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 ZDHHC11BP0C7U3 371 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 EIF2DP41214 584 aaKnown RBP16.98■□□□□ 0.31
SGCE-208ENST00000450385 GAS6Q14393 721 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 PREPLQ4J6C6 727 aaPredicted RBP16.98■□□□□ 0.31
SGCE-208ENST00000450385 SCARA5Q6ZMJ2 495 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 ADGRG2Q8IZP9 1017 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 CAMKK1Q8N5S9 505 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 TAS1R2Q8TE23 839 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 FBXO32Q969P5 355 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 KCNK16Q96T55 309 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 P2RY13Q9BPV8 354 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 UBXN6Q9BZV1 441 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 SDCBP2Q9H190 292 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 TLR8Q9NR97 1041 aaKnown RBP16.98■□□□□ 0.31
SGCE-208ENST00000450385 TMEM30AQ9NV96 361 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 RAB23Q9ULC3 237 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 SPTBN4Q9H254 2564 aa16.98■□□□□ 0.31
SGCE-208ENST00000450385 OTOL1A6NHN0 477 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms