RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ASPAP45381 313 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 SATB1Q01826 763 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 NR1H3Q13133 447 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 ORC1Q13415 861 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 CCINQ13939 588 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 GAS6Q14393 721 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 ZCWPW2Q504Y3 356 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 ZNF658Q5TYW1 1059 aaPredicted RBP16.21■□□□□ 0.19
CHD3-205ENST00000449744 Q6ZS52 159 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 CRYBG2Q8N1P7 616 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 TAS1R2Q8TE23 839 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 RUBCNQ92622 972 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 NELL1Q92832 810 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 KCNK16Q96T55 309 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 GTPBP4Q9BZE4 634 aaKnown RBP16.21■□□□□ 0.19
CHD3-205ENST00000449744 ECT2Q9H8V3 914 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 CYP3A43Q9HB55 503 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 TMEM8AQ9HCN3 771 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 KRT82Q9NSB4 513 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 TMEM30AQ9NV96 361 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 ANAPC1Q9H1A4 1944 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 OTOL1A6NHN0 477 aaPredicted RBP16.2■□□□□ 0.18
CHD3-205ENST00000449744 LEFTY2O00292 366 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 TRDMT1O14717 391 aaKnown RBP16.2■□□□□ 0.18
CHD3-205ENST00000449744 LILRB5O75023 590 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 CCDC130P13994 396 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 GTF2H1P32780 548 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 PRCPP42785 496 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 SLC5A3P53794 718 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 FOXK2Q01167 660 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 TMEM196Q5HYL7 178 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 WDR44Q5JSH3 913 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 KRT39Q6A163 491 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 PAQR9Q6ZVX9 377 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 FUKQ8N0W3 1084 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 ENGASEQ8NFI3 743 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 SLC2A14Q8TDB8 520 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 OVCA2Q8WZ82 227 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 EEF2KMTQ96G04 330 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 TIGD1Q96MW7 591 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 P2RY13Q9BPV8 354 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 NIF3L1Q9GZT8 377 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 FAM49BQ9NUQ9 324 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 COMMD8Q9NX08 183 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 HMGXB4Q9UGU5 601 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 PCDHA5Q9Y5H7 936 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 CPQQ9Y646 472 aa16.2■□□□□ 0.18
CHD3-205ENST00000449744 NFATC1O95644 943 aa16.19■□□□□ 0.18
CHD3-205ENST00000449744 MBL2P11226 248 aaPredicted RBP16.19■□□□□ 0.18
CHD3-205ENST00000449744 TDGF1P13385 188 aa16.19■□□□□ 0.18
CHD3-205ENST00000449744 CD58P19256 250 aa16.19■□□□□ 0.18
CHD3-205ENST00000449744 ADORA2BP29275 332 aa16.19■□□□□ 0.18
CHD3-205ENST00000449744 GJA4P35212 333 aa16.19■□□□□ 0.18
CHD3-205ENST00000449744 MXI1P50539 228 aa16.19■□□□□ 0.18
CHD3-205ENST00000449744 GALK1P51570 392 aa16.19■□□□□ 0.18
CHD3-205ENST00000449744 SLC7A9P82251 487 aa16.19■□□□□ 0.18
CHD3-205ENST00000449744 EML3Q32P44 896 aa16.19■□□□□ 0.18
CHD3-205ENST00000449744 FSTL4Q6MZW2 842 aa16.19■□□□□ 0.18
CHD3-205ENST00000449744 SUMF1Q8NBK3 374 aa16.19■□□□□ 0.18
CHD3-205ENST00000449744 ERCC4Q92889 916 aaPredicted RBP16.19■□□□□ 0.18
CHD3-205ENST00000449744 SECISBP2LQ93073 1101 aaKnown RBP16.19■□□□□ 0.18
CHD3-205ENST00000449744 NT5C1AQ9BXI3 368 aa16.19■□□□□ 0.18
CHD3-205ENST00000449744 RNF38Q9H0F5 515 aa16.19■□□□□ 0.18
CHD3-205ENST00000449744 APOBEC3GQ9HC16 384 aaKnown RBP16.19■□□□□ 0.18
CHD3-205ENST00000449744 SMPD4Q9NXE4 827 aa16.19■□□□□ 0.18
CHD3-205ENST00000449744 NCDNQ9UBB6 729 aa16.19■□□□□ 0.18
CHD3-205ENST00000449744 CHORDC1Q9UHD1 332 aaPredicted RBP16.19■□□□□ 0.18
CHD3-205ENST00000449744 ATG13O75143 517 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 PAPSS2O95340 614 aaPredicted RBP16.18■□□□□ 0.18
CHD3-205ENST00000449744 OLFM2O95897 454 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 OAS1P00973 400 aaKnown RBP16.18■□□□□ 0.18
CHD3-205ENST00000449744 FAM200BP0CF97 657 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 DRD1P21728 446 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 MAP3K7CLP57077 242 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 FKBP3Q00688 224 aaKnown RBP16.18■□□□□ 0.18
CHD3-205ENST00000449744 INCA1Q0VD86 236 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 STIM1Q13586 685 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 COBLL1Q53SF7 1204 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 DCAF17Q5H9S7 520 aaPredicted RBP16.18■□□□□ 0.18
CHD3-205ENST00000449744 TCERG1LQ5VWI1 586 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 DDX42Q86XP3 938 aaKnown RBP eCLIP16.18■□□□□ 0.18
CHD3-205ENST00000449744 C12orf29Q8N999 325 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 SCAMP5Q8TAC9 235 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 CD101Q93033 1021 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 EPC1Q9H2F5 836 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 LINC00597Q9H2U6 94 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 RAB23Q9ULC3 237 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 SMG5Q9UPR3 1016 aaKnown RBP16.18■□□□□ 0.18
CHD3-205ENST00000449744 SPTBN4Q9H254 2564 aa16.18■□□□□ 0.18
CHD3-205ENST00000449744 SLC9A3R1O14745 358 aaPredicted RBP16.17■□□□□ 0.18
CHD3-205ENST00000449744 TNFRSF10BO14763 440 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 SLC16A3O15427 465 aaKnown RBP16.17■□□□□ 0.18
CHD3-205ENST00000449744 EGFP01133 1207 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 ZXDBP98169 803 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 FBXO43Q4G163 708 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 HECTD3Q5T447 861 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 LONP2Q86WA8 852 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 KIAA1958Q8N8K9 716 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 FBXL13Q8NEE6 735 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 ZMIZ2Q8NF64 920 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms