RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 MED8Q96G25 268 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 GMIPQ9P107 970 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 TEX15Q9BXT5 2789 aa13.54□□□□□ -0.24
AC004540.1-204ENST00000449537 DOPEY2Q9Y3R5 2298 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 LACTBL1A8MY62 500 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 BTBD18B2RXH4 712 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 CYB561D2O14569 222 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 CLDN3O15551 220 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 CDK4P11802 303 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 NCAM1P13591 858 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 XBP1P17861 261 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 ADSSP30520 456 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 TNFSF9P41273 254 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 EVCP57679 992 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 ZXDBP98169 803 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 PPP2R3AQ06190 1150 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 NFE2Q16621 373 aaPredicted RBP13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 ARHGAP40Q5TG30 622 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 CPLX2Q6PUV4 134 aaKnown RBP13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 PRICKLE2Q7Z3G6 844 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 CADM4Q8NFZ8 388 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 ERLEC1Q96DZ1 483 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 JAKMIP1Q96N16 626 aaKnown RBP13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 TSPAN18Q96SJ8 248 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 AGXT2Q9BYV1 514 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 KMT5AQ9NQR1 393 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 ARHGAP28Q9P2N2 729 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 PCDHGA1Q9Y5H4 931 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 COL12A1Q99715 3063 aa13.53□□□□□ -0.24
AC004540.1-204ENST00000449537 A0A1B0GVT2 93 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 ADH5P11766 374 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 RPA1P27694 616 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 MATR3P43243 847 aaKnown RBP eCLIP13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 UCNP55089 124 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 STRN3Q13033 797 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 SAFBQ15424 915 aaKnown RBP eCLIP13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 BROXQ5VW32 411 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 SPATA1Q5VX52 437 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 C9orf57Q5W0N0 161 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 WSCD1Q658N2 575 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 PHTF2Q8N3S3 785 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 TOE1Q96GM8 510 aaKnown RBP13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 MRGPRX1Q96LB2 322 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 MTMR9Q96QG7 549 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 LGMNQ99538 433 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 GPR174Q9BXC1 333 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 CD93Q9NPY3 652 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 TMLHEQ9NVH6 421 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 DEC1Q9P2X7 70 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 FTSJ1Q9UET6 329 aa13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 COL5A1P20908 1838 aaPredicted RBP13.52□□□□□ -0.25
AC004540.1-204ENST00000449537 PIRO00625 290 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 PCDHGA12O60330 932 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 NEMFO60524 1076 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 REC8O95072 547 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 PFKLP17858 780 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 CYP2F1P24903 491 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 CSNK1EP49674 416 aaKnown RBP13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 CLDN6P56747 220 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 TMPRSS3P57727 454 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 TSPY1Q01534 308 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 GAD2Q05329 585 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 C10orf76Q5T2E6 689 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 DCAF12L1Q5VU92 463 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 BTBD8Q5XKL5 378 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 KIAA1324Q6UXG2 1013 aaKnown RBP13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 SKAP1Q86WV1 359 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 MIB1Q86YT6 1006 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 CHPFQ8IZ52 775 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 NAT16Q8N8M0 369 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 PYM1Q9BRP8 204 aaKnown RBP13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 SLC6A17Q9H1V8 727 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 BHMT2Q9H2M3 363 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 CPNE5Q9HCH3 593 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 WSB2Q9NYS7 404 aaPredicted RBP13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 EIF2B4Q9UI10 523 aaKnown RBP13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 HCN2Q9UL51 889 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 STARD13Q9Y3M8 1113 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 ANAPC1Q9H1A4 1944 aa13.51□□□□□ -0.25
AC004540.1-204ENST00000449537 ANK1P16157 1881 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 METTL12A8MUP2 240 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 SCAMP3O14828 347 aaKnown RBP13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 BRINP1O60477 761 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 C1SP09871 688 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 RPS6KB1P23443 525 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 MCL1Q07820 350 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 KIF19Q2TAC6 998 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 INAVAQ3KP66 663 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 LY6G5CQ5SRR4 150 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 USP49Q70CQ1 688 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 ERMNQ8TAM6 284 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 TTC9Q92623 222 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 ACOX2Q99424 681 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 RPF1Q9H9Y2 349 aaKnown RBP13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 CD248Q9HCU0 757 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 ABCB6Q9NP58 842 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 TBC1D14Q9P2M4 693 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 ANKMY1Q9P2S6 941 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 PCDHB6Q9Y5E3 794 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 HEMK1Q9Y5R4 338 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms