RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 IFRD2Q12894 506 aaPredicted RBP16.54■□□□□ 0.24
TRA2A-203ENST00000448549 TRPC3Q13507 836 aa16.54■□□□□ 0.24
TRA2A-203ENST00000448549 N4BP2L1Q5TBK1 243 aaPredicted RBP16.54■□□□□ 0.24
TRA2A-203ENST00000448549 FOXD4L5Q5VV16 416 aaPredicted RBP16.54■□□□□ 0.24
TRA2A-203ENST00000448549 UNC13DQ70J99 1090 aa16.54■□□□□ 0.24
TRA2A-203ENST00000448549 CCDC33Q8N5R6 958 aa16.54■□□□□ 0.24
TRA2A-203ENST00000448549 FOXD4L4Q8WXT5 416 aaPredicted RBP16.54■□□□□ 0.24
TRA2A-203ENST00000448549 B3GNT5Q9BYG0 378 aa16.54■□□□□ 0.24
TRA2A-203ENST00000448549 TPSD1Q9BZJ3 242 aa16.54■□□□□ 0.24
TRA2A-203ENST00000448549 ELOVL4Q9GZR5 314 aa16.54■□□□□ 0.24
TRA2A-203ENST00000448549 XYLT2Q9H1B5 865 aa16.54■□□□□ 0.24
TRA2A-203ENST00000448549 CFAP97Q9P2B7 532 aa16.54■□□□□ 0.24
TRA2A-203ENST00000448549 UBE4BO95155 1302 aa16.53■□□□□ 0.24
TRA2A-203ENST00000448549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.53■□□□□ 0.24
TRA2A-203ENST00000448549 BCLAF3A2AJT9 711 aaKnown RBP16.53■□□□□ 0.24
TRA2A-203ENST00000448549 POLR2DO15514 142 aaKnown RBP16.53■□□□□ 0.24
TRA2A-203ENST00000448549 YEATS4O95619 227 aa16.53■□□□□ 0.24
TRA2A-203ENST00000448549 CAVIN2O95810 425 aa16.53■□□□□ 0.24
TRA2A-203ENST00000448549 SLC6A11P48066 632 aa16.53■□□□□ 0.24
TRA2A-203ENST00000448549 SNRPFP62306 86 aaKnown RBP16.53■□□□□ 0.24
TRA2A-203ENST00000448549 EHHADHQ08426 723 aa16.53■□□□□ 0.24
TRA2A-203ENST00000448549 DHCR24Q15392 516 aa16.53■□□□□ 0.24
TRA2A-203ENST00000448549 USP39Q53GS9 565 aaKnown RBP16.53■□□□□ 0.24
TRA2A-203ENST00000448549 RNF43Q68DV7 783 aa16.53■□□□□ 0.24
TRA2A-203ENST00000448549 ANO7Q6IWH7 933 aa16.53■□□□□ 0.24
TRA2A-203ENST00000448549 SFTPA1Q8IWL2 248 aa16.53■□□□□ 0.24
TRA2A-203ENST00000448549 B3GALNT2Q8NCR0 500 aa16.53■□□□□ 0.24
TRA2A-203ENST00000448549 CHAMP1Q96JM3 812 aa16.53■□□□□ 0.24
TRA2A-203ENST00000448549 SLITRK1Q96PX8 696 aa16.53■□□□□ 0.24
TRA2A-203ENST00000448549 SLC39A2Q9NP94 309 aa16.53■□□□□ 0.24
TRA2A-203ENST00000448549 EPG5Q9HCE0 2579 aa16.53■□□□□ 0.24
TRA2A-203ENST00000448549 SLC9A3R1O14745 358 aaPredicted RBP16.52■□□□□ 0.24
TRA2A-203ENST00000448549 PHACTR2O75167 634 aa16.52■□□□□ 0.24
TRA2A-203ENST00000448549 STAU1O95793 577 aaKnown RBP16.52■□□□□ 0.24
TRA2A-203ENST00000448549 MBL2P11226 248 aaPredicted RBP16.52■□□□□ 0.24
TRA2A-203ENST00000448549 YWHAQP27348 245 aa16.52■□□□□ 0.24
TRA2A-203ENST00000448549 ATICP31939 592 aa16.52■□□□□ 0.24
TRA2A-203ENST00000448549 CASP4P49662 377 aa16.52■□□□□ 0.24
TRA2A-203ENST00000448549 CDH8P55286 799 aa16.52■□□□□ 0.24
TRA2A-203ENST00000448549 MESP2Q0VG99 397 aa16.52■□□□□ 0.24
TRA2A-203ENST00000448549 ST3GAL2Q16842 350 aa16.52■□□□□ 0.24
TRA2A-203ENST00000448549 FOXD4L6Q3SYB3 417 aaPredicted RBP16.52■□□□□ 0.24
TRA2A-203ENST00000448549 RHBDF2Q6PJF5 856 aa16.52■□□□□ 0.24
TRA2A-203ENST00000448549 FOXD4L3Q6VB84 417 aaPredicted RBP16.52■□□□□ 0.24
TRA2A-203ENST00000448549 RASSF3Q86WH2 238 aa16.52■□□□□ 0.24
TRA2A-203ENST00000448549 TTC30AQ86WT1 665 aa16.52■□□□□ 0.24
TRA2A-203ENST00000448549 NUP93Q8N1F7 819 aa16.52■□□□□ 0.24
TRA2A-203ENST00000448549 KIAA1958Q8N8K9 716 aa16.52■□□□□ 0.24
TRA2A-203ENST00000448549 KCNK16Q96T55 309 aa16.52■□□□□ 0.24
TRA2A-203ENST00000448549 LSM14BQ9BX40 385 aaKnown RBP16.52■□□□□ 0.24
TRA2A-203ENST00000448549 MMP17Q9ULZ9 603 aa16.52■□□□□ 0.24
TRA2A-203ENST00000448549 ACACBO00763 2458 aa16.52■□□□□ 0.23
TRA2A-203ENST00000448549 OBSL1O75147 1896 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 EXOC3O60645 756 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 PMLP29590 882 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 AFMP43652 599 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 MRPS21P82921 87 aaKnown RBP16.51■□□□□ 0.23
TRA2A-203ENST00000448549 CUL4BQ13620 913 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 CRY1Q16526 586 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 KNOP1Q1ED39 458 aaKnown RBP16.51■□□□□ 0.23
TRA2A-203ENST00000448549 BMT2Q1RMZ1 405 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 TMEM92Q6UXU6 159 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 C12orf40Q86WS4 652 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 C12orf56Q8IXR9 622 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 ALLCQ8N6M5 410 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 MDGA1Q8NFP4 955 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 PLEKHO2Q8TD55 490 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 SYAP1Q96A49 352 aaPredicted RBP16.51■□□□□ 0.23
TRA2A-203ENST00000448549 ELMO3Q96BJ8 720 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 CNOT6LQ96LI5 555 aaKnown RBP16.51■□□□□ 0.23
TRA2A-203ENST00000448549 PNKPQ96T60 521 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 EDEM2Q9BV94 578 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 SMYD3Q9H7B4 428 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 MAGEF1Q9HAY2 307 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 CHORDC1Q9UHD1 332 aaPredicted RBP16.51■□□□□ 0.23
TRA2A-203ENST00000448549 ANGPTL2Q9UKU9 493 aa16.51■□□□□ 0.23
TRA2A-203ENST00000448549 TPRP12270 2363 aaKnown RBP16.51■□□□□ 0.23
TRA2A-203ENST00000448549 COCHO43405 550 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 CLSTN1O94985 981 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 RTN3O95197 1032 aaPredicted RBP16.5■□□□□ 0.23
TRA2A-203ENST00000448549 KAT7O95251 611 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 KCNK5O95279 499 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 ADH1CP00326 375 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 HNRNPLP14866 589 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRA2A-203ENST00000448549 BCKDHBP21953 392 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 TIE1P35590 1138 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 BIRC3Q13489 604 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 EMC10Q5UCC4 262 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 PMS2CLQ68D20 193 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 C11orf74Q86VG3 221 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 DDX42Q86XP3 938 aaKnown RBP eCLIP16.5■□□□□ 0.231e-7■□□□□ 8.5
TRA2A-203ENST00000448549 TXNDC5Q8NBS9 432 aaKnown RBP16.5■□□□□ 0.23
TRA2A-203ENST00000448549 SCAMP5Q8TAC9 235 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 FBXO32Q969P5 355 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 MED10Q9BTT4 135 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 CGNQ9P2M7 1197 aaKnown RBP16.5■□□□□ 0.23
TRA2A-203ENST00000448549 DENND4CQ5VZ89 1909 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 SDK1Q7Z5N4 2213 aa16.5■□□□□ 0.23
TRA2A-203ENST00000448549 PVALEFA0A1B0GWK0 134 aa16.49■□□□□ 0.23
TRA2A-203ENST00000448549 C4orf47A7E2U8 309 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms