RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 TDRD12Q587J7 1177 aaKnown RBP12.24□□□□□ -0.45
LINC00408-201ENST00000447784 TRIM72Q6ZMU5 477 aa12.24□□□□□ -0.45
LINC00408-201ENST00000447784 PAQR9Q6ZVX9 377 aa12.24□□□□□ -0.45
LINC00408-201ENST00000447784 NOP9Q86U38 636 aaKnown RBP12.24□□□□□ -0.45
LINC00408-201ENST00000447784 TTC9BQ8N6N2 239 aa12.24□□□□□ -0.45
LINC00408-201ENST00000447784 SPC24Q8NBT2 197 aa12.24□□□□□ -0.45
LINC00408-201ENST00000447784 TMEM35BQ8NCS4 154 aa12.24□□□□□ -0.45
LINC00408-201ENST00000447784 EPS8L1Q8TE68 723 aa12.24□□□□□ -0.45
LINC00408-201ENST00000447784 GIPC2Q8TF65 315 aa12.24□□□□□ -0.45
LINC00408-201ENST00000447784 KCNK16Q96T55 309 aa12.24□□□□□ -0.45
LINC00408-201ENST00000447784 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC00408-201ENST00000447784 BDP1A6H8Y1 2624 aa12.24□□□□□ -0.45
LINC00408-201ENST00000447784 CCL16O15467 120 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 VNN2O95498 520 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 SERPING1P05155 500 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 CSH1P0DML2 217 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 CSH2P0DML3 217 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 ADKP55263 362 aaKnown RBP12.23□□□□□ -0.45
LINC00408-201ENST00000447784 PDE4CQ08493 712 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 TBX2Q13207 712 aaPredicted RBP12.23□□□□□ -0.45
LINC00408-201ENST00000447784 CYP4A22Q5TCH4 519 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 DENND1BQ6P3S1 775 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 TRIM67Q6ZTA4 783 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 CLEC20AQ6ZU45 233 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 IRF2BP2Q7Z5L9 587 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 BMP8AQ7Z5Y6 402 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 PASD1Q8IV76 773 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 UBALD2Q8IYN6 164 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 MSANTD4Q8NCY6 345 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 GPR152Q8TDT2 470 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 SECISBP2LQ93073 1101 aaKnown RBP12.23□□□□□ -0.45
LINC00408-201ENST00000447784 SPATA17Q96L03 361 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 SMOQ99835 787 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 AGPAT1Q99943 283 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 ZSWIM1Q9BR11 485 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC00408-201ENST00000447784 UBXN6Q9BZV1 441 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 LHX5Q9H2C1 402 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 CRISPLD1Q9H336 500 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 SYNCQ9H7C4 482 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 LRRC4Q9HBW1 653 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 CSNK1G1Q9HCP0 422 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 ABHD10Q9NUJ1 306 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 PCDHGC3Q9UN70 934 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 SORCS3Q9UPU3 1222 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 ZFP37Q9Y6Q3 630 aaPredicted RBP12.23□□□□□ -0.45
LINC00408-201ENST00000447784 CITO14578 2027 aa12.23□□□□□ -0.45
LINC00408-201ENST00000447784 FAM86C2PA6NEL3 165 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 SLC38A8A6NNN8 435 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 XPO1O14980 1071 aaKnown RBP12.22□□□□□ -0.45
LINC00408-201ENST00000447784 RTN3O95197 1032 aaPredicted RBP12.22□□□□□ -0.45
LINC00408-201ENST00000447784 FGF19O95750 216 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 LSM8O95777 96 aaKnown RBP12.22□□□□□ -0.45
LINC00408-201ENST00000447784 MMEP08473 750 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 SKILP12757 684 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 PTPN2P17706 415 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 PRKCIP41743 596 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 GPR15P49685 360 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 SIGLEC14Q08ET2 396 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 MTMR3Q13615 1198 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 SDHAF4Q5VUM1 108 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 DENND5BQ6ZUT9 1274 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 GRASPQ7Z6J2 395 aaPredicted RBP12.22□□□□□ -0.45
LINC00408-201ENST00000447784 DNAJB7Q7Z6W7 309 aaPredicted RBP12.22□□□□□ -0.45
LINC00408-201ENST00000447784 PIGZQ86VD9 579 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 TTC30AQ86WT1 665 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 NUP93Q8N1F7 819 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 SIX6OS1Q8N1H7 587 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 LEMD2Q8NC56 503 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 IPO4Q8TEX9 1081 aaKnown RBP12.22□□□□□ -0.45
LINC00408-201ENST00000447784 SLC20A1Q8WUM9 679 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 NXPE3Q969Y0 559 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 GCNAQ96QF7 691 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 DNAJC7Q99615 494 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 CORO1BQ9BR76 489 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 MIS12Q9H081 205 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 DEF6Q9H4E7 631 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 FBXO44Q9H4M3 255 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 HAUS4Q9H6D7 363 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 PNPLA8Q9NP80 782 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 ASAH2Q9NR71 780 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 ST7Q9NRC1 585 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 IGSF9Q9P2J2 1179 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 EPS15L1Q9UBC2 864 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 UXTQ9UBK9 157 aaPredicted RBP12.22□□□□□ -0.45
LINC00408-201ENST00000447784 LIMD1Q9UGP4 676 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 NOCTQ9UK39 431 aaKnown RBP12.22□□□□□ -0.45
LINC00408-201ENST00000447784 MAGED2Q9UNF1 606 aaPredicted RBP12.22□□□□□ -0.45
LINC00408-201ENST00000447784 C5orf42Q9H799 3197 aa12.22□□□□□ -0.45
LINC00408-201ENST00000447784 ZNF197O14709 1029 aa12.21□□□□□ -0.45
LINC00408-201ENST00000447784 BEST1O76090 585 aa12.21□□□□□ -0.45
LINC00408-201ENST00000447784 ATF6P18850 670 aa12.21□□□□□ -0.45
LINC00408-201ENST00000447784 COL9A1P20849 921 aa12.21□□□□□ -0.45
LINC00408-201ENST00000447784 FSHRP23945 695 aa12.21□□□□□ -0.45
LINC00408-201ENST00000447784 HNRNPH3P31942 346 aaKnown RBP12.21□□□□□ -0.45
LINC00408-201ENST00000447784 GBP2P32456 591 aaPredicted RBP12.21□□□□□ -0.45
LINC00408-201ENST00000447784 GPD2P43304 727 aa12.21□□□□□ -0.45
LINC00408-201ENST00000447784 ACADSBP45954 432 aa12.21□□□□□ -0.45
LINC00408-201ENST00000447784 PLA2G4AP47712 749 aa12.21□□□□□ -0.45
LINC00408-201ENST00000447784 CACNA2D1P54289 1103 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms