RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 FAM47CQ5HY64 1035 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 TTC19Q6DKK2 380 aaPredicted RBP20.44■□□□□ 0.86
FAM3A-215ENST00000447601 SERINC5Q86VE9 423 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 HHIPL1Q96JK4 782 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 PPP1R10Q96QC0 940 aaKnown RBP20.44■□□□□ 0.86
FAM3A-215ENST00000447601 PEBP4Q96S96 227 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 CALN1Q9BXU9 219 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 SENP6Q9GZR1 1112 aaPredicted RBP20.44■□□□□ 0.86
FAM3A-215ENST00000447601 ZMYND15Q9H091 742 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 LRRC4CQ9HCJ2 640 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.44■□□□□ 0.86
FAM3A-215ENST00000447601 ST3GAL5Q9UNP4 418 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 TLDC2A0PJX2 215 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 CCDC130P13994 396 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 LMO2P25791 158 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 ADORA2BP29275 332 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 ACADSBP45954 432 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 TAF5Q15542 800 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 SKIDA1Q1XH10 827 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 BOLA3Q53S33 107 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 UBAP2Q5T6F2 1119 aaKnown RBP20.43■□□□□ 0.86
FAM3A-215ENST00000447601 RPAINQ86UA6 219 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 MAP7D3Q8IWC1 876 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 SCUBE3Q8IX30 993 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 CFAP57Q96MR6 1250 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 TMEM121Q9BTD3 319 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 FAM105AQ9NUU6 356 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 TPX2Q9ULW0 747 aaKnown RBP20.43■□□□□ 0.86
FAM3A-215ENST00000447601 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.43■□□□□ 0.86
FAM3A-215ENST00000447601 RASGRF2O14827 1237 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 HCRTO43612 131 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 ENDOD1O94919 500 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 AGTP01019 485 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 RPL34P49207 117 aaKnown RBP20.43■□□□□ 0.86
FAM3A-215ENST00000447601 CDH6P55285 790 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 GUCY1A3Q02108 690 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 GPS1Q13098 491 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 TFDP2Q14188 446 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 CDO1Q16878 200 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 SH3PXD2AQ5TCZ1 1133 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 CYP4V2Q6ZWL3 525 aaPredicted RBP20.43■□□□□ 0.86
FAM3A-215ENST00000447601 PRUNE1Q86TP1 453 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 GLIS1Q8NBF1 620 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 UHMK1Q8TAS1 419 aaKnown RBP20.43■□□□□ 0.86
FAM3A-215ENST00000447601 TEKT4Q8WW24 435 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 ZIC5Q96T25 663 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 TBCBQ99426 244 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 DDX23Q9BUQ8 820 aaKnown RBP20.43■□□□□ 0.86
FAM3A-215ENST00000447601 MAK16Q9BXY0 300 aaKnown RBP20.43■□□□□ 0.86
FAM3A-215ENST00000447601 ADAM7Q9H2U9 754 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 CNOT10Q9H9A5 744 aaKnown RBP20.43■□□□□ 0.86
FAM3A-215ENST00000447601 SLC12A6Q9UHW9 1150 aa20.43■□□□□ 0.86
FAM3A-215ENST00000447601 ACSL3O95573 720 aa20.42■□□□□ 0.86
FAM3A-215ENST00000447601 ZSCAN5DPP0CG00 497 aa20.42■□□□□ 0.86
FAM3A-215ENST00000447601 LSP1P33241 339 aa20.42■□□□□ 0.86
FAM3A-215ENST00000447601 RDXP35241 583 aaKnown RBP20.42■□□□□ 0.86
FAM3A-215ENST00000447601 ATP11AP98196 1134 aa20.42■□□□□ 0.86
FAM3A-215ENST00000447601 MORF4L2Q15014 288 aa20.42■□□□□ 0.86
FAM3A-215ENST00000447601 PDK2Q15119 407 aa20.42■□□□□ 0.86
FAM3A-215ENST00000447601 ZNF618Q5T7W0 954 aa20.42■□□□□ 0.86
FAM3A-215ENST00000447601 SLC26A9Q7LBE3 791 aa20.42■□□□□ 0.86
FAM3A-215ENST00000447601 ARCQ7LC44 396 aa20.42■□□□□ 0.86
FAM3A-215ENST00000447601 SLC2A14Q8TDB8 520 aa20.42■□□□□ 0.86
FAM3A-215ENST00000447601 FAM172AQ8WUF8 416 aa20.42■□□□□ 0.86
FAM3A-215ENST00000447601 HSFY1Q96LI6 401 aa20.42■□□□□ 0.86
FAM3A-215ENST00000447601 LPIN3Q9BQK8 851 aa20.42■□□□□ 0.86
FAM3A-215ENST00000447601 NGRNQ9NPE2 291 aaKnown RBP20.42■□□□□ 0.86
FAM3A-215ENST00000447601 XPNPEP3Q9NQH7 507 aa20.42■□□□□ 0.86
FAM3A-215ENST00000447601 SCN1AP35498 2009 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 SRRM3A6NNA2 597 aaPredicted RBP20.41■□□□□ 0.86
FAM3A-215ENST00000447601 DCDC2CA8MYV0 355 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 GPR182O15218 404 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 ADAMTS4O75173 837 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 GABBR2O75899 941 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 IFNB1P01574 187 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 CTSHP09668 335 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 PRKCZQ05513 592 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 KRT81Q14533 505 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 MFSD5Q6N075 450 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 PCGF5Q86SE9 256 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 B3GALNT2Q8NCR0 500 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 KHSRPQ92945 711 aaKnown RBP eCLIP20.41■□□□□ 0.86
FAM3A-215ENST00000447601 ZFP42Q96MM3 310 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 DNAJC17Q9NVM6 304 aaKnown RBP20.41■□□□□ 0.86
FAM3A-215ENST00000447601 NINJ2Q9NZG7 142 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 SAE1Q9UBE0 346 aaPredicted RBP20.41■□□□□ 0.86
FAM3A-215ENST00000447601 SHOC2Q9UQ13 582 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 SMIM23A6NLE4 172 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 CYB561D2O14569 222 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 MCF2LO15068 1137 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 CHRNA1P02708 482 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 PTPN9P43378 593 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 SLC8A3P57103 927 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 CACNB2Q08289 660 aaPredicted RBP20.41■□□□□ 0.86
FAM3A-215ENST00000447601 MGAT3Q09327 533 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 VSIG1Q86XK7 387 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 BCAS4Q8TDM0 211 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 EPS8L3Q8TE67 593 aaKnown RBP20.41■□□□□ 0.86
FAM3A-215ENST00000447601 RSAD2Q8WXG1 361 aa20.41■□□□□ 0.86
FAM3A-215ENST00000447601 WNT8BQ93098 351 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms