RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 AP3M2P53677 418 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 PLCB2Q00722 1185 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 LMAN2Q12907 356 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 STIM1Q13586 685 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 STXBP5Q5T5C0 1151 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 PMS2CLQ68D20 193 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 ANKRD40Q6AI12 368 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 OVOS1Q6IE37 1185 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 CYP2U1Q7Z449 544 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 C11orf74Q86VG3 221 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 ZC3H3Q8IXZ2 948 aaKnown RBP13.31□□□□□ -0.28
SSR4-205ENST00000447375 TRIML1Q8N9V2 468 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 HPDLQ96IR7 371 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 OBP2AQ9NY56 170 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 AFF4Q9UHB7 1163 aaKnown RBP13.31□□□□□ -0.28
SSR4-205ENST00000447375 BIN1O00499 593 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 TRDMT1O14717 391 aaKnown RBP13.3□□□□□ -0.28
SSR4-205ENST00000447375 PSMA7O14818 248 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 CETN3O15182 167 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 EGFP01133 1207 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 C4BPAP04003 597 aaKnown RBP13.3□□□□□ -0.28
SSR4-205ENST00000447375 PMS1P54277 932 aaKnown RBP13.3□□□□□ -0.28
SSR4-205ENST00000447375 DLG4P78352 724 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 FKBP3Q00688 224 aaKnown RBP13.3□□□□□ -0.28
SSR4-205ENST00000447375 LRRC63Q05C16 580 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 MYO1EQ12965 1108 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 C1orf220Q5T0J3 134 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 WSCD1Q658N2 575 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 FOXR2Q6PJQ5 311 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 INTS8Q75QN2 995 aaKnown RBP13.3□□□□□ -0.28
SSR4-205ENST00000447375 LIMS2Q7Z4I7 341 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 METTL23Q86XA0 190 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 FAM186BQ8IYM0 893 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 BPIFB1Q8TDL5 484 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 PIGKQ92643 395 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 LRIG1Q96JA1 1093 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 TSG101Q99816 390 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 LRRC3Q9BY71 257 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 CLSTN2Q9H4D0 955 aa13.3□□□□□ -0.28
SSR4-205ENST00000447375 THG1LQ9NWX6 298 aaKnown RBP13.3□□□□□ -0.28
SSR4-205ENST00000447375 R3HCC1Q9Y3T6 440 aaKnown RBP13.3□□□□□ -0.28
SSR4-205ENST00000447375 EML5Q05BV3 1969 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 STAU1O95793 577 aaKnown RBP13.29□□□□□ -0.28
SSR4-205ENST00000447375 ATICP31939 592 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 MAPK8P45983 427 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 DHPSP49366 369 aaPredicted RBP13.29□□□□□ -0.28
SSR4-205ENST00000447375 VAMP7P51809 220 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 DGKEP52429 567 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 C19orf57Q0VDD7 668 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 BFSP1Q12934 665 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 GPR17Q13304 367 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 USP39Q53GS9 565 aaKnown RBP13.29□□□□□ -0.28
SSR4-205ENST00000447375 TDRD10Q5VZ19 366 aaKnown RBP13.29□□□□□ -0.28
SSR4-205ENST00000447375 RNF19BQ6ZMZ0 732 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 SYT13Q7L8C5 426 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 DPH6Q7L8W6 267 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 PIP4P1Q86T03 277 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 TMC8Q8IU68 726 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 THEM5Q8N1Q8 247 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 TMEM86AQ8N2M4 240 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 TOP6BLQ8N6T0 577 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 SPATA18Q8TC71 538 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 EEF2KMTQ96G04 330 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 NUSAP1Q9BXS6 441 aaKnown RBP13.29□□□□□ -0.28
SSR4-205ENST00000447375 XYLT2Q9H1B5 865 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 ATXN3LQ9H3M9 355 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 CCDC86Q9H6F5 360 aaKnown RBP13.29□□□□□ -0.28
SSR4-205ENST00000447375 CACNA2D2Q9NY47 1150 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 EVLQ9UI08 416 aaPredicted RBP13.29□□□□□ -0.28
SSR4-205ENST00000447375 SNX9Q9Y5X1 595 aa13.29□□□□□ -0.28
SSR4-205ENST00000447375 GOLGA6L22H0YM25 854 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 GABRDO14764 452 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 HUS1O60921 280 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 FAM163BP0C2L3 166 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 KRT13P13646 458 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 CPB1P15086 417 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 SEMA3BQ13214 749 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 PLD1Q13393 1074 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 TRPC3Q13507 836 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 RUNX3Q13761 415 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 DMC1Q14565 340 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 ZNF423Q2M1K9 1284 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 SOWAHAQ2M3V2 549 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 ZACNQ401N2 412 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 TRIM61Q5EBN2 209 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 GPR158Q5T848 1215 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 TTI2Q6NXR4 508 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 SV2AQ7L0J3 742 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 RAB44Q7Z6P3 723 aaPredicted RBP13.28□□□□□ -0.28
SSR4-205ENST00000447375 PDCL2Q8N4E4 241 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 OR10T2Q8NGX3 314 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 RPLP0P6Q8NHW5 317 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 GPT2Q8TD30 523 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 DUSP9Q99956 384 aaKnown RBP13.28□□□□□ -0.28
SSR4-205ENST00000447375 ZCWPW1Q9H0M4 648 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 VRTNQ9H8Y1 702 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 GKN1Q9NS71 199 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 L1RE1Q9UN81 338 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 YIPF1Q9Y548 306 aa13.28□□□□□ -0.28
SSR4-205ENST00000447375 TRIM49BA6NDI0 452 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms