RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 OXNAD1Q96HP4 312 aaPredicted RBP19.92■□□□□ 0.78
SDCBP-204ENST00000447182 SYNCQ9H7C4 482 aa19.92■□□□□ 0.78
SDCBP-204ENST00000447182 CPSF3Q9UKF6 684 aaKnown RBP19.92■□□□□ 0.78
SDCBP-204ENST00000447182 CHADO15335 359 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 SERPINB4P48594 390 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 TMEM132BQ14DG7 1078 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 RCN1Q15293 331 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 CCDC6Q16204 474 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 RINLQ6ZS11 566 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 ZBTB33Q86T24 672 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 NIM1KQ8IY84 436 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 VPS52Q8N1B4 723 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 TAB3Q8N5C8 712 aaPredicted RBP19.91■□□□□ 0.78
SDCBP-204ENST00000447182 SPATA18Q8TC71 538 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 TTC17Q96AE7 1141 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 MCUR1Q96AQ8 359 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 ACO2Q99798 780 aaKnown RBP19.91■□□□□ 0.78
SDCBP-204ENST00000447182 TCHPQ9BT92 498 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 LRCH1Q9Y2L9 728 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 LCTP09848 1927 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 DOCK1Q14185 1865 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 ENDOD1O94919 500 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 NPTXRO95502 500 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 TRUB2O95900 331 aaKnown RBP19.91■□□□□ 0.78
SDCBP-204ENST00000447182 C1QAP02745 245 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 HOXC6P09630 235 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 ESRRAP11474 423 aaPredicted RBP19.91■□□□□ 0.78
SDCBP-204ENST00000447182 MIPP30301 263 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 ROR1Q01973 937 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 CXCL9Q07325 125 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 MTM1Q13496 603 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 KPNB1Q14974 876 aaKnown RBP19.91■□□□□ 0.78
SDCBP-204ENST00000447182 NOMO1Q15155 1222 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 STXBP2Q15833 593 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 SNX30Q5VWJ9 437 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 IRGCQ6NXR0 463 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 SCARA5Q6ZMJ2 495 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 SLC26A11Q86WA9 606 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 PRR11Q96HE9 360 aaPredicted RBP19.91■□□□□ 0.78
SDCBP-204ENST00000447182 CPXM1Q96SM3 734 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 TEX13BQ9BXU2 312 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 FRMD8Q9BZ67 464 aaPredicted RBP19.91■□□□□ 0.78
SDCBP-204ENST00000447182 METTL5Q9NRN9 209 aaKnown RBP19.91■□□□□ 0.78
SDCBP-204ENST00000447182 NRBP2Q9NSY0 501 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 STX18Q9P2W9 335 aaKnown RBP19.91■□□□□ 0.78
SDCBP-204ENST00000447182 ZNF180Q9UJW8 692 aa19.91■□□□□ 0.78
SDCBP-204ENST00000447182 A8MXQ7 604 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 MAFO75444 373 aaPredicted RBP19.9■□□□□ 0.78
SDCBP-204ENST00000447182 PSMG1O95456 288 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 MYL2P10916 166 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 SLC34A1Q06495 639 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 TTC39BQ5VTQ0 682 aaPredicted RBP19.9■□□□□ 0.78
SDCBP-204ENST00000447182 EMC1Q8N766 993 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 C12orf42Q96LP6 360 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 KCNK4Q9NYG8 393 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 USP18Q9UMW8 372 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 SSC5DA1L4H1 1573 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 FCHO1O14526 889 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 KIF3CO14782 793 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 RNF8O76064 485 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 NEFHP12036 1026 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 GABRB2P47870 512 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 TFAMQ00059 246 aaKnown RBP19.9■□□□□ 0.78
SDCBP-204ENST00000447182 NAIF1Q69YI7 327 aaPredicted RBP19.9■□□□□ 0.78
SDCBP-204ENST00000447182 TRIM42Q8IWZ5 723 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 ARHGAP24Q8N264 748 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 SLC4A11Q8NBS3 891 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 ZNF483Q8TF39 744 aaPredicted RBP19.9■□□□□ 0.78
SDCBP-204ENST00000447182 APBB2Q92870 758 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 MCRS1Q96EZ8 462 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 C7orf26Q96N11 449 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 SRPK1Q96SB4 655 aaKnown RBP19.9■□□□□ 0.78
SDCBP-204ENST00000447182 PCYT2Q99447 389 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 PCSK1NQ9UHG2 260 aa19.9■□□□□ 0.78
SDCBP-204ENST00000447182 COPEO14579 308 aa19.89■□□□□ 0.77
SDCBP-204ENST00000447182 KRT36O76013 467 aa19.89■□□□□ 0.77
SDCBP-204ENST00000447182 ERBB2P04626 1255 aa19.89■□□□□ 0.77
SDCBP-204ENST00000447182 PDHA1P08559 390 aa19.89■□□□□ 0.77
SDCBP-204ENST00000447182 CD19P15391 556 aa19.89■□□□□ 0.77
SDCBP-204ENST00000447182 RAP1GDS1P52306 607 aa19.89■□□□□ 0.77
SDCBP-204ENST00000447182 YWHAGP61981 247 aaKnown RBP eCLIP19.89■□□□□ 0.77
SDCBP-204ENST00000447182 TAF5Q15542 800 aa19.89■□□□□ 0.77
SDCBP-204ENST00000447182 ZNF280CQ8ND82 737 aa19.89■□□□□ 0.77
SDCBP-204ENST00000447182 NRG4Q8WWG1 115 aa19.89■□□□□ 0.77
SDCBP-204ENST00000447182 PRPF31Q8WWY3 499 aaKnown RBP19.89■□□□□ 0.77
SDCBP-204ENST00000447182 BCO2Q9BYV7 579 aa19.89■□□□□ 0.77
SDCBP-204ENST00000447182 AS3MTQ9HBK9 375 aa19.89■□□□□ 0.77
SDCBP-204ENST00000447182 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.89■□□□□ 0.77
SDCBP-204ENST00000447182 PPME1Q9Y570 386 aa19.89■□□□□ 0.77
SDCBP-204ENST00000447182 CAPN9O14815 690 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 B4GALT4O60513 344 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 CDK18Q07002 472 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 ANGEL2Q5VTE6 544 aaKnown RBP19.88■□□□□ 0.77
SDCBP-204ENST00000447182 DARS2Q6PI48 645 aaKnown RBP19.88■□□□□ 0.77
SDCBP-204ENST00000447182 LRRC74BQ6ZQY2 392 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 TTC7BQ86TV6 843 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 SCYL3Q8IZE3 742 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 DNERQ8NFT8 737 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 HSPH1Q92598 858 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 CALN1Q9BXU9 219 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms