RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SP2Q02086 613 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 ITIH3Q06033 890 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 PTPRRQ15256 657 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 ARHGAP40Q5TG30 622 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 KLHDC7AQ5VTJ3 777 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 ICE2Q659A1 982 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 RGS7BPQ6MZT1 257 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 ATP11CQ8NB49 1132 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 BPIFB1Q8TDL5 484 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 NEU4Q8WWR8 484 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 GCC1Q96CN9 775 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 PPP1R9BQ96SB3 815 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 PRRX2Q99811 253 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 GDF15Q99988 308 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 ACTRT3Q9BYD9 372 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 NRBP1Q9UHY1 535 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 GPR52Q9Y2T5 361 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 CDY1Q9Y6F8 540 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 A0A087WV62 115 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 A0A087WZ62 844 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 FOXN1O15353 648 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 YY2O15391 372 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 RRP9O43818 475 aaKnown RBP5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 ESRRBO95718 433 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 RHOP08100 348 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 BTF3P20290 206 aaKnown RBP5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 PCSK6P29122 969 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 FOLR3P41439 243 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 MAPK9P45984 424 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 KLF10Q13118 480 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 TXNRD1Q16881 649 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 LIX1LQ8IVB5 337 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 LCORLQ8N3X6 602 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 SDR16C5Q8N3Y7 309 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 VGLL2Q8N8G2 317 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 B3GALNT2Q8NCR0 500 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 BRI3BPQ8WY22 251 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 ATG4AQ8WYN0 398 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 IQCDQ96DY2 449 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 PGBD1Q96JS3 809 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 SCAND2PQ9GZW5 306 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 PCED1AQ9H1Q7 454 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 DKK4Q9UBT3 224 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 SERTAD3Q9UJW9 196 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 KAT6AQ92794 2004 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 SALL3Q9BXA9 1300 aa5.23□□□□□ -1.57
HMGB1P48-201ENST00000446155 H7C4K7 107 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 M0R3H8 397 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 AREL1O15033 823 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 PPM1DO15297 605 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 MPPED1O15442 326 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 EPB41L2O43491 1005 aaKnown RBP5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 FGF18O76093 207 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 PROZP22891 400 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 IL1R2P27930 398 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 AVPR1BP47901 424 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 ATXN1P54253 815 aaKnown RBP5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 SETQ01105 290 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 KRT17Q04695 432 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 ICA1Q05084 483 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 DDX10Q13206 875 aaKnown RBP5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 TBX2Q13207 712 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 MPP3Q13368 585 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 BLMHQ13867 455 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 ARHGEF7Q14155 803 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 E2F2Q14209 437 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 INSCQ1MX18 579 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 ZNF750Q32MQ0 723 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 NBPF8Q3BBV2 869 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 PTCHD3Q3KNS1 767 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 CCDC38Q502W7 563 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 FAM209BQ5JX69 171 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 HYIQ5T013 277 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 HECTD2Q5U5R9 776 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 HIBCHQ6NVY1 386 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 MZT2AQ6P582 158 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 CATSPERGQ6ZRH7 1159 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 KRT28Q7Z3Y7 464 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 MAVSQ7Z434 540 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 KCTD20Q7Z5Y7 419 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 YAF2Q8IY57 180 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 SLC44A3Q8N4M1 653 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 IL17REQ8NFR9 667 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 RFKQ969G6 155 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 EIF2AK1Q9BQI3 630 aaKnown RBP5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 TPSD1Q9BZJ3 242 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 TRIM5Q9C035 493 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 TOR3AQ9H497 397 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 KLC4Q9NSK0 619 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 FOXJ2Q9P0K8 574 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 ZNF212Q9UDV6 495 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 ING1Q9UK53 422 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 ITGB1BP2Q9UKP3 347 aa5.22□□□□□ -1.57
HMGB1P48-201ENST00000446155 TMEM191CA6NGB0 347 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 ZAR1LA6NP61 321 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 ADM5C9JUS6 153 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 EXOC5O00471 708 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 APOL1O14791 398 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms