RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 GPR15P49685 360 aa18.2■□□□□ 0.5
LIME1-202ENST00000444951 MAP3K7CLP57077 242 aa18.2■□□□□ 0.5
LIME1-202ENST00000444951 SMARCB1Q12824 385 aa18.2■□□□□ 0.5
LIME1-202ENST00000444951 CNGA2Q16280 664 aa18.2■□□□□ 0.5
LIME1-202ENST00000444951 SDHAF4Q5VUM1 108 aa18.2■□□□□ 0.5
LIME1-202ENST00000444951 LILRA6Q6PI73 481 aa18.2■□□□□ 0.5
LIME1-202ENST00000444951 CCDC149Q6ZUS6 474 aa18.2■□□□□ 0.5
LIME1-202ENST00000444951 CCDC186Q7Z3E2 898 aa18.2■□□□□ 0.5
LIME1-202ENST00000444951 GPR152Q8TDT2 470 aa18.2■□□□□ 0.5
LIME1-202ENST00000444951 C2orf15Q8WU43 125 aaKnown RBP18.2■□□□□ 0.5
LIME1-202ENST00000444951 SMARCD1Q96GM5 515 aa18.2■□□□□ 0.5
LIME1-202ENST00000444951 AGPAT1Q99943 283 aa18.2■□□□□ 0.5
LIME1-202ENST00000444951 HAPLN1P10915 354 aaPredicted RBP18.19■□□□□ 0.5
LIME1-202ENST00000444951 CHRNB2P17787 502 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 TNFAIP3P21580 790 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 CDR2Q01850 454 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 STILQ15468 1287 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 DDR2Q16832 855 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 LIN9Q5TKA1 542 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 WDR59Q6PJI9 974 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 LCLAT1Q6UWP7 414 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 ZNF571Q7Z3V5 609 aaPredicted RBP18.19■□□□□ 0.5
LIME1-202ENST00000444951 TTC30AQ86WT1 665 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 PLCD3Q8N3E9 789 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 STKLD1Q8NE28 680 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 CMASQ8NFW8 434 aaPredicted RBP18.19■□□□□ 0.5
LIME1-202ENST00000444951 SLC7A14Q8TBB6 771 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 DDX1Q92499 740 aaKnown RBP18.19■□□□□ 0.5
LIME1-202ENST00000444951 ZNF707Q96C28 371 aaPredicted RBP18.19■□□□□ 0.5
LIME1-202ENST00000444951 KCNK16Q96T55 309 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 PRRX2Q99811 253 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.19■□□□□ 0.5
LIME1-202ENST00000444951 TMEM30AQ9NV96 361 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 FBXW11Q9UKB1 542 aa18.19■□□□□ 0.5
LIME1-202ENST00000444951 CCDC195A0A1B0GUA6 201 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 F8VP50 259 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 H0Y858 1186 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 BEST1O76090 585 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 PTMAP06454 111 aaKnown RBP18.18■□□□□ 0.5
LIME1-202ENST00000444951 ANXA13P27216 316 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 BCAT1P54687 386 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 SLC8A3P57103 927 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 PDE4CQ08493 712 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 CFAP221Q4G0U5 840 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 HGSNATQ68CP4 663 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 ANKRD52Q8NB46 1076 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 GIPC2Q8TF65 315 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 SECISBP2LQ93073 1101 aaKnown RBP18.18■□□□□ 0.5
LIME1-202ENST00000444951 FUBP3Q96I24 572 aaKnown RBP eCLIP18.18■□□□□ 0.5
LIME1-202ENST00000444951 CHP1Q99653 195 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 SMOQ99835 787 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 DUSP16Q9BY84 665 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 ABCB6Q9NP58 842 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 ARHGAP20Q9P2F6 1191 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 YIPF1Q9Y548 306 aa18.18■□□□□ 0.5
LIME1-202ENST00000444951 ZFHX2Q9C0A1 2572 aaPredicted RBP18.18■□□□□ 0.5
LIME1-202ENST00000444951 TULP2O00295 520 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 NARSO43776 548 aaKnown RBP18.17■□□□□ 0.5
LIME1-202ENST00000444951 C8AP07357 584 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 NPR3P17342 541 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 HNRNPH3P31942 346 aaKnown RBP18.17■□□□□ 0.5
LIME1-202ENST00000444951 EIF4A3P38919 411 aaKnown RBP18.17■□□□□ 0.5
LIME1-202ENST00000444951 PRKCIP41743 596 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 ALDH1A3P47895 512 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 TUFMP49411 452 aaKnown RBP18.17■□□□□ 0.5
LIME1-202ENST00000444951 RGS7P49802 495 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 FMO1Q01740 532 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 BST2Q10589 180 aaKnown RBP18.17■□□□□ 0.5
LIME1-202ENST00000444951 TWF1Q12792 350 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 IFRD2Q12894 506 aaPredicted RBP18.17■□□□□ 0.5
LIME1-202ENST00000444951 CWF19L1Q69YN2 538 aaKnown RBP18.17■□□□□ 0.5
LIME1-202ENST00000444951 SMYD5Q6GMV2 418 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 VSTM1Q6UX27 236 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 CLEC20AQ6ZU45 233 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 OTOP3Q7RTS5 596 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 ZNF677Q86XU0 584 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 TCEAL8Q8IYN2 117 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 RSAD2Q8WXG1 361 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 ACSF2Q96CM8 615 aaPredicted RBP18.17■□□□□ 0.5
LIME1-202ENST00000444951 PANX2Q96RD6 677 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 KCNK12Q9HB15 430 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 DMAP1Q9NPF5 467 aaPredicted RBP18.17■□□□□ 0.5
LIME1-202ENST00000444951 CEP83Q9Y592 693 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 INSL5Q9Y5Q6 135 aa18.17■□□□□ 0.5
LIME1-202ENST00000444951 BZW2Q9Y6E2 419 aaKnown RBP18.17■□□□□ 0.5
LIME1-202ENST00000444951 TMCO5BA8MYB1 307 aa18.16■□□□□ 0.5
LIME1-202ENST00000444951 PIK3R2O00459 728 aa18.16■□□□□ 0.5
LIME1-202ENST00000444951 GALR2O43603 387 aaPredicted RBP18.16■□□□□ 0.5
LIME1-202ENST00000444951 LRG1P02750 347 aa18.16■□□□□ 0.5
LIME1-202ENST00000444951 MAGEA11P43364 429 aa18.16■□□□□ 0.5
LIME1-202ENST00000444951 GSDMDP57764 484 aa18.16■□□□□ 0.5
LIME1-202ENST00000444951 RPL10AP62906 217 aaKnown RBP18.16■□□□□ 0.5
LIME1-202ENST00000444951 PPM1LQ5SGD2 360 aa18.16■□□□□ 0.5
LIME1-202ENST00000444951 NAA35Q5VZE5 725 aa18.16■□□□□ 0.5
LIME1-202ENST00000444951 C1orf131Q8NDD1 294 aaKnown RBP18.16■□□□□ 0.5
LIME1-202ENST00000444951 ZMIZ2Q8NF64 920 aa18.16■□□□□ 0.5
LIME1-202ENST00000444951 CPA5Q8WXQ8 436 aa18.16■□□□□ 0.5
LIME1-202ENST00000444951 MYADMQ96S97 322 aa18.16■□□□□ 0.5
LIME1-202ENST00000444951 PCDHB18PQ96TA0 734 aa18.16■□□□□ 0.5
LIME1-202ENST00000444951 DEF6Q9H4E7 631 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms