RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 KANSL1Q7Z3B3 1105 aa4.18□□□□□ -1.74
UBR3-206ENST00000444475 GBP7Q8N8V2 638 aaPredicted RBP4.18□□□□□ -1.74
UBR3-206ENST00000444475 TGFBRAP1Q8WUH2 860 aa4.18□□□□□ -1.74
UBR3-206ENST00000444475 CUL5Q93034 780 aa4.18□□□□□ -1.74
UBR3-206ENST00000444475 MUL1Q969V5 352 aa4.18□□□□□ -1.74
UBR3-206ENST00000444475 SHISA4Q96DD7 197 aa4.18□□□□□ -1.74
UBR3-206ENST00000444475 FAM111AQ96PZ2 611 aa4.18□□□□□ -1.74
UBR3-206ENST00000444475 CDK5RAP1Q96SZ6 601 aaKnown RBP4.18□□□□□ -1.74
UBR3-206ENST00000444475 VCX3BQ9H321 246 aa4.18□□□□□ -1.74
UBR3-206ENST00000444475 SEPT9Q9UHD8 586 aaPredicted RBP4.18□□□□□ -1.74
UBR3-206ENST00000444475 LHX6Q9UPM6 363 aa4.18□□□□□ -1.74
UBR3-206ENST00000444475 NAALAD2Q9Y3Q0 740 aa4.18□□□□□ -1.74
UBR3-206ENST00000444475 DNMBPQ6XZF7 1577 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 FAM86C2PA6NEL3 165 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 PSMD9O00233 223 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 ARNTLO00327 626 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 O00370 1275 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 CHRNA1P02708 482 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 TUBBP07437 444 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 NT5C2P49902 561 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 RARSP54136 660 aaKnown RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 TUBB4BP68371 445 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 NUCB2P80303 420 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 SNX1Q13596 522 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 RPS6KA2Q15349 733 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 SEC23BQ15437 767 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 FBXO43Q4G163 708 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 ZNF772Q68DY9 489 aaPredicted RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 GPR153Q6NV75 609 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 BTLAQ7Z6A9 289 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 OSTM1Q86WC4 334 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 SP8Q8IXZ3 490 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 KIAA2013Q8IYS2 634 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 CMTR1Q8N1G2 835 aaKnown RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 FAM181AQ8N9Y4 354 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 KCNG4Q8TDN1 519 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 ZBTB9Q96C00 473 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 NLRP4Q96MN2 994 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 PRAM1Q96QH2 718 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 SH3GL2Q99962 352 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 ADAM7Q9H2U9 754 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 XKR8Q9H6D3 395 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 PICK1Q9NRD5 415 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 MARCH4Q9P2E8 410 aaPredicted RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 COLQQ9Y215 455 aaPredicted RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 GMEB1Q9Y692 573 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 RSPH10B2B2RC85 870 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 PDE2AO00408 941 aaPredicted RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 PPEF2O14830 753 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 CASC3O15234 703 aaKnown RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 TGFB1I1O43294 461 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 KDM1AO60341 852 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 HMGCRP04035 888 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 SUPT20HL2P0C7V6 817 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 RSPH10BP0C881 870 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 RPL9P32969 192 aaKnown RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 VPS41P49754 854 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 GSCP56915 257 aaPredicted RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 DLG4P78352 724 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 RNASELQ05823 741 aaKnown RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 RALGDSQ12967 914 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 PAK1Q13153 545 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 GALNT3Q14435 633 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 RCN1Q15293 331 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 GRAMD2AQ8IUY3 354 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 CNTROBQ8N137 903 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 GLIS1Q8NBF1 620 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 KREMEN2Q8NCW0 462 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 PCDH19Q8TAB3 1148 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 HASPINQ8TF76 798 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 WNT8BQ93098 351 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 MASTLQ96GX5 879 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 SLC2A13Q96QE2 648 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 EDEM2Q9BV94 578 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 ZMAT4Q9H898 229 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 IL1RAPL2Q9NP60 686 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 CABP5Q9NP86 173 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 MBD1Q9UIS9 605 aaPredicted RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 RPH3AQ9Y2J0 694 aaPredicted RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 GPC6Q9Y625 555 aaPredicted RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 A0A087WZ62 844 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 PSMA7O14818 248 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 S100A9P06702 114 aaKnown RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 EPB41P11171 864 aaKnown RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 OSMP13725 252 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 GALP22466 123 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 CA8P35219 290 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 PITPNBP48739 271 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 SPIDRQ14159 915 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 IQCB1Q15051 598 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 FSCN1Q16658 493 aaKnown RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 HADHQ16836 314 aaKnown RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 FAM187BQ17R55 369 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 PRSS53Q2L4Q9 553 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 EXOSC6Q5RKV6 272 aaKnown RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 ADALQ6DHV7 355 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 ASTLQ6HA08 431 aaPredicted RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 ADGRD1Q6QNK2 874 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 ISLR2Q6UXK2 745 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 TUSC5Q8IXB3 177 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms