RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PCDHGA2Q9Y5H1 932 aa21.31■■□□□ 1
LRCH3-208ENST00000443727 DENND4CQ5VZ89 1909 aa21.31■■□□□ 1
LRCH3-208ENST00000443727 PTPRZ1P23471 2315 aaPredicted RBP21.3■■□□□ 1
LRCH3-208ENST00000443727 MYO15AQ9UKN7 3530 aa21.3■■□□□ 1
LRCH3-208ENST00000443727 CD58P19256 250 aa21.3■■□□□ 1
LRCH3-208ENST00000443727 CXCL12P48061 93 aa21.3■■□□□ 1
LRCH3-208ENST00000443727 MXI1P50539 228 aa21.3■■□□□ 1
LRCH3-208ENST00000443727 GRSF1Q12849 480 aaKnown RBP eCLIP21.3■■□□□ 1
LRCH3-208ENST00000443727 COBLL1Q53SF7 1204 aa21.3■■□□□ 1
LRCH3-208ENST00000443727 FUKQ8N0W3 1084 aa21.3■■□□□ 1
LRCH3-208ENST00000443727 CRYBG2Q8N1P7 616 aa21.3■■□□□ 1
LRCH3-208ENST00000443727 SPEM1Q8N4L4 309 aa21.3■■□□□ 1
LRCH3-208ENST00000443727 PDZD8Q8NEN9 1154 aa21.3■■□□□ 1
LRCH3-208ENST00000443727 ATP2A3Q93084 1043 aa21.3■■□□□ 1
LRCH3-208ENST00000443727 EXOC4Q96A65 974 aa21.3■■□□□ 1
LRCH3-208ENST00000443727 HINFPQ9BQA5 517 aa21.3■■□□□ 1
LRCH3-208ENST00000443727 APOBEC3GQ9HC16 384 aaKnown RBP21.3■■□□□ 1
LRCH3-208ENST00000443727 WNT6Q9Y6F9 365 aa21.3■■□□□ 1
LRCH3-208ENST00000443727 OBSL1O75147 1896 aa21.3■■□□□ 1
LRCH3-208ENST00000443727 OTOL1A6NHN0 477 aaPredicted RBP21.29■■□□□ 1
LRCH3-208ENST00000443727 ADORA2BP29275 332 aa21.29■■□□□ 1
LRCH3-208ENST00000443727 NRLP54845 237 aa21.29■■□□□ 1
LRCH3-208ENST00000443727 FKBP3Q00688 224 aaKnown RBP21.29■■□□□ 1
LRCH3-208ENST00000443727 USP4Q13107 963 aa21.29■■□□□ 1
LRCH3-208ENST00000443727 DCAF17Q5H9S7 520 aaPredicted RBP21.29■■□□□ 1
LRCH3-208ENST00000443727 ANKRD40Q6AI12 368 aa21.29■■□□□ 1
LRCH3-208ENST00000443727 ISM2Q6H9L7 571 aa21.29■■□□□ 1
LRCH3-208ENST00000443727 MAMSTRQ6ZN01 415 aa21.29■■□□□ 1
LRCH3-208ENST00000443727 PAQR9Q6ZVX9 377 aa21.29■■□□□ 1
LRCH3-208ENST00000443727 C12orf29Q8N999 325 aa21.29■■□□□ 1
LRCH3-208ENST00000443727 SPATA20Q8TB22 786 aa21.29■■□□□ 1
LRCH3-208ENST00000443727 NT5C1AQ9BXI3 368 aa21.29■■□□□ 1
LRCH3-208ENST00000443727 FAM126AQ9BYI3 521 aaPredicted RBP21.29■■□□□ 1
LRCH3-208ENST00000443727 ECT2Q9H8V3 914 aa21.29■■□□□ 1
LRCH3-208ENST00000443727 SMPD4Q9NXE4 827 aa21.29■■□□□ 1
LRCH3-208ENST00000443727 PTPRDP23468 1912 aa21.29■■□□□ 1
LRCH3-208ENST00000443727 VPS13AQ96RL7 3174 aa21.29■■□□□ 1
LRCH3-208ENST00000443727 PATJQ8NI35 1801 aa21.28■■□□□ 1
LRCH3-208ENST00000443727 LEFTY2O00292 366 aa21.28■■□□□ 1
LRCH3-208ENST00000443727 PSMA7O14818 248 aa21.28■■□□□ 1
LRCH3-208ENST00000443727 SLC16A3O15427 465 aaKnown RBP21.28■■□□□ 1
LRCH3-208ENST00000443727 FAM200BP0CF97 657 aa21.28■■□□□ 1
LRCH3-208ENST00000443727 SLC5A3P53794 718 aa21.28■■□□□ 1
LRCH3-208ENST00000443727 MAP3K7CLP57077 242 aa21.28■■□□□ 1
LRCH3-208ENST00000443727 LRRC63Q05C16 580 aa21.28■■□□□ 1
LRCH3-208ENST00000443727 INCA1Q0VD86 236 aa21.28■■□□□ 1
LRCH3-208ENST00000443727 NR1H3Q13133 447 aa21.28■■□□□ 1
LRCH3-208ENST00000443727 WDR44Q5JSH3 913 aa21.28■■□□□ 1
LRCH3-208ENST00000443727 Q6ZS52 159 aa21.28■■□□□ 1
LRCH3-208ENST00000443727 SYNPOQ8N3V7 929 aa21.28■■□□□ 1
LRCH3-208ENST00000443727 FBXL13Q8NEE6 735 aa21.28■■□□□ 1
LRCH3-208ENST00000443727 SCAMP5Q8TAC9 235 aa21.28■■□□□ 1
LRCH3-208ENST00000443727 OVCA2Q8WZ82 227 aa21.28■■□□□ 1
LRCH3-208ENST00000443727 CHORDC1Q9UHD1 332 aaPredicted RBP21.28■■□□□ 1
LRCH3-208ENST00000443727 CIZ1Q9ULV3 898 aaPredicted RBP21.28■■□□□ 1
LRCH3-208ENST00000443727 MBL2P11226 248 aaPredicted RBP21.27■■□□□ 1
LRCH3-208ENST00000443727 SLC7A9P82251 487 aa21.27■■□□□ 1
LRCH3-208ENST00000443727 SATB1Q01826 763 aa21.27■■□□□ 1
LRCH3-208ENST00000443727 CCINQ13939 588 aa21.27■■□□□ 1
LRCH3-208ENST00000443727 SMOQ99835 787 aa21.27■■□□□ 1
LRCH3-208ENST00000443727 RNF38Q9H0F5 515 aa21.27■■□□□ 1
LRCH3-208ENST00000443727 COMMD8Q9NX08 183 aa21.27■■□□□ 1
LRCH3-208ENST00000443727 RAB20Q9NX57 234 aa21.27■■□□□ 1
LRCH3-208ENST00000443727 CPQQ9Y646 472 aa21.27■■□□□ 1
LRCH3-208ENST00000443727 GREB1Q4ZG55 1949 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 TRIM49BA6NDI0 452 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 TRDMT1O14717 391 aaKnown RBP21.26■□□□□ 0.99
LRCH3-208ENST00000443727 OAS1P00973 400 aaKnown RBP21.26■□□□□ 0.99
LRCH3-208ENST00000443727 TCF3P15923 654 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 GJA4P35212 333 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 PMS1P54277 932 aaKnown RBP21.26■□□□□ 0.99
LRCH3-208ENST00000443727 GAS6Q14393 721 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 EML3Q32P44 896 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 TMEM196Q5HYL7 178 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 HECTD3Q5T447 861 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 ELOA2Q8IYF1 753 aaPredicted RBP21.26■□□□□ 0.99
LRCH3-208ENST00000443727 ZBTB44Q8NCP5 570 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 SEMA4DQ92854 862 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 JAKMIP2Q96AA8 810 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 CYFIP2Q96F07 1278 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 DHTKD1Q96HY7 919 aaPredicted RBP21.26■□□□□ 0.99
LRCH3-208ENST00000443727 TWNKQ96RR1 684 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 P2RY13Q9BPV8 354 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 NACA2Q9H009 215 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 LINC00597Q9H2U6 94 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 FBXO44Q9H4M3 255 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 CFAP97Q9P2B7 532 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 ARMCX3Q9UH62 379 aaPredicted RBP21.26■□□□□ 0.99
LRCH3-208ENST00000443727 MAN1B1Q9UKM7 699 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 FAM186AA6NE01 2351 aa21.26■□□□□ 0.99
LRCH3-208ENST00000443727 DMDP11532 3685 aa21.25■□□□□ 0.99
LRCH3-208ENST00000443727 TNFRSF10BO14763 440 aa21.25■□□□□ 0.99
LRCH3-208ENST00000443727 GADD45BO75293 160 aaPredicted RBP21.25■□□□□ 0.99
LRCH3-208ENST00000443727 CILPO75339 1184 aa21.25■□□□□ 0.99
LRCH3-208ENST00000443727 BEST1O76090 585 aa21.25■□□□□ 0.99
LRCH3-208ENST00000443727 NFATC1O95644 943 aa21.25■□□□□ 0.99
LRCH3-208ENST00000443727 PPP1R2P41236 205 aa21.25■□□□□ 0.99
LRCH3-208ENST00000443727 KLHL10Q6JEL2 608 aa21.25■□□□□ 0.99
LRCH3-208ENST00000443727 DDX42Q86XP3 938 aaKnown RBP eCLIP21.25■□□□□ 0.99
LRCH3-208ENST00000443727 TTC39CQ8N584 583 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms