RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 FMN2Q9NZ56 1722 aa23.27■■□□□ 1.32
CTDSPL-206ENST00000443503 SERPINB4P48594 390 aa23.27■■□□□ 1.32
CTDSPL-206ENST00000443503 SLC9A9Q8IVB4 645 aa23.27■■□□□ 1.32
CTDSPL-206ENST00000443503 E2F6O75461 281 aa23.27■■□□□ 1.32
CTDSPL-206ENST00000443503 ODC1P11926 461 aa23.27■■□□□ 1.32
CTDSPL-206ENST00000443503 PDAP1Q13442 181 aaKnown RBP23.27■■□□□ 1.32
CTDSPL-206ENST00000443503 VGLL4Q14135 290 aa23.27■■□□□ 1.32
CTDSPL-206ENST00000443503 ANO5Q75V66 913 aa23.27■■□□□ 1.32
CTDSPL-206ENST00000443503 BCL9LQ86UU0 1499 aa23.27■■□□□ 1.32
CTDSPL-206ENST00000443503 ZNF263O14978 683 aa23.27■■□□□ 1.32
CTDSPL-206ENST00000443503 GLRA2P23416 452 aa23.27■■□□□ 1.32
CTDSPL-206ENST00000443503 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.27■■□□□ 1.32
CTDSPL-206ENST00000443503 C10orf120Q5SQS8 335 aa23.27■■□□□ 1.32
CTDSPL-206ENST00000443503 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.27■■□□□ 1.32
CTDSPL-206ENST00000443503 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.27■■□□□ 1.32
CTDSPL-206ENST00000443503 LACTBL1A8MY62 500 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 NDUFS3O75489 264 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 AKAP5P24588 427 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 PHEXP78562 749 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 LRRC36Q1X8D7 754 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 DNAL1Q4LDG9 190 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 IRF2BP2Q7Z5L9 587 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 EML4Q9HC35 981 aaKnown RBP23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 DNPEPQ9ULA0 475 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 F8VP50 259 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 PDHXO00330 501 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 MYBL2P10244 700 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 PECAM1P16284 738 aaPredicted RBP23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 MAPRE1Q15691 268 aaKnown RBP23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 MIB1Q86YT6 1006 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 SLITRK1Q96PX8 696 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 TARSP26639 723 aaKnown RBP23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 IFI35P80217 286 aaPredicted RBP23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 MAPRE2Q15555 327 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 HYIQ5T013 277 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 CATSPERGQ6ZRH7 1159 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 TSPAN17Q96FV3 270 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 ITGA11Q9UKX5 1188 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 ANP32DO95626 131 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 LRRC8EQ6NSJ5 796 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 CNPY4Q8N129 248 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 SHOC2Q9UQ13 582 aa23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 TIMM13Q9Y5L4 95 aaPredicted RBP23.26■■□□□ 1.31
CTDSPL-206ENST00000443503 SDR42E2A6NKP2 422 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 AIM2O14862 343 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 THP07101 528 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 ADORA2AP29274 412 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 MAP3K7CLP57077 242 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 ZNF268Q14587 947 aaPredicted RBP23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 NLRP9Q7RTR0 991 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 GPC2Q8N158 579 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 HASPINQ8TF76 798 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 DNAJB3Q8WWF6 145 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 SHC3Q92529 594 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 FAM84AQ96KN4 292 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 VAV3Q9UKW4 847 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 BST2Q10589 180 aaKnown RBP23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 DNAJC6O75061 913 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 F9P00740 461 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 FAM71AQ8IYT1 594 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 C3orf20Q8ND61 904 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 TMA16Q96EY4 203 aaKnown RBP23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 CENPKQ9BS16 269 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 SHCBP1LQ9BZQ2 653 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 HEY2Q9UBP5 337 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 TBC1D12O60347 775 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 ACAT1P24752 427 aaKnown RBP23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 ITGB3BPQ13352 177 aaPredicted RBP23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 CAPRIN1Q14444 709 aaKnown RBP23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 CALML6Q8TD86 181 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 SNX19Q92543 992 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 COPS5Q92905 334 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 YIPF3Q9GZM5 350 aa23.25■■□□□ 1.31
CTDSPL-206ENST00000443503 ROBO3Q96MS0 1386 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 KBTBD13C9JR72 458 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 DNALI1O14645 258 aaPredicted RBP23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 MARCKSL1P49006 195 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 NPY5RQ15761 445 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 CDCA5Q96FF9 252 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 PPME1Q9Y570 386 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 SLC30A1Q9Y6M5 507 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 TWF1Q12792 350 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 BMT2Q1RMZ1 405 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 PRPF39Q86UA1 669 aaKnown RBP23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 SCUBE3Q8IX30 993 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 MAGEB18Q96M61 343 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 KLHL2O95198 593 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 JCHAINP01591 159 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 AARSP49588 968 aaKnown RBP eCLIP23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 AMPD2Q01433 879 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 LBRQ14739 615 aaKnown RBP23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 UGCGQ16739 394 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 SLC26A11Q86WA9 606 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 TRIM54Q9BYV2 358 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 MOSPD1Q9UJG1 213 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 CDY2AQ9Y6F7 541 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 CDY1Q9Y6F8 540 aa23.24■■□□□ 1.31
CTDSPL-206ENST00000443503 IRF6O14896 467 aa23.23■■□□□ 1.31
CTDSPL-206ENST00000443503 GPR182O15218 404 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms