RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 KRT39Q6A163 491 aa20.09■□□□□ 0.81
HMGB3P22-201ENST00000442010 TSSK4Q6SA08 328 aa20.09■□□□□ 0.81
HMGB3P22-201ENST00000442010 ADSSL1Q8N142 457 aa20.09■□□□□ 0.81
HMGB3P22-201ENST00000442010 ZBTB44Q8NCP5 570 aa20.09■□□□□ 0.81
HMGB3P22-201ENST00000442010 OSCP1Q8WVF1 389 aa20.09■□□□□ 0.81
HMGB3P22-201ENST00000442010 SMARCE1Q969G3 411 aa20.09■□□□□ 0.81
HMGB3P22-201ENST00000442010 SMARCD1Q96GM5 515 aa20.09■□□□□ 0.81
HMGB3P22-201ENST00000442010 RNF38Q9H0F5 515 aa20.09■□□□□ 0.81
HMGB3P22-201ENST00000442010 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.09■□□□□ 0.81
HMGB3P22-201ENST00000442010 ATP8B3O60423 1300 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 FAM92AA1XBS5 289 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 CETN3O15182 167 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 LILRB5O75023 590 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 BEST1O76090 585 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 CCDC130P13994 396 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 PDE6CP51160 858 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 SLC7A9P82251 487 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 LRRC32Q14392 662 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 PDGFRLQ15198 375 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 ANKRD40Q6AI12 368 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 CC2D1AQ6P1N0 951 aaPredicted RBP20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 C12orf29Q8N999 325 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 SH3RF2Q8TEC5 729 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 WHAMMQ8TF30 809 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 SEMA4DQ92854 862 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 SMOQ99835 787 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 MMRN2Q9H8L6 949 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 CYP3A43Q9HB55 503 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 CSNK1G1Q9HCP0 422 aa20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 DMAP1Q9NPF5 467 aaPredicted RBP20.08■□□□□ 0.81
HMGB3P22-201ENST00000442010 TRIM49BA6NDI0 452 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 TRDMT1O14717 391 aaKnown RBP20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 GADD45BO75293 160 aaPredicted RBP20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 RTN3O95197 1032 aaPredicted RBP20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 LMNAP02545 664 aaKnown RBP20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 EPB41P11171 864 aaKnown RBP20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 YWHAQP27348 245 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 EML3Q32P44 896 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 TMEM196Q5HYL7 178 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 Q6ZS52 159 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 SPEM1Q8N4L4 309 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 SUMF1Q8NBK3 374 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 SCAMP5Q8TAC9 235 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 SLC2A14Q8TDB8 520 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 OVCA2Q8WZ82 227 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 SLITRK1Q96PX8 696 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 MED10Q9BTT4 135 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 IMPG2Q9BZV3 1241 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 NIF3L1Q9GZT8 377 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 ECT2Q9H8V3 914 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 KRT82Q9NSB4 513 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 ZSCAN32Q9NX65 697 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 DUS2Q9NX74 493 aaKnown RBP20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 CIZ1Q9ULV3 898 aaPredicted RBP20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 PCDHGA2Q9Y5H1 932 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 ZNF292O60281 2723 aa20.07■□□□□ 0.8
HMGB3P22-201ENST00000442010 SLC16A3O15427 465 aaKnown RBP20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 CILPO75339 1184 aa20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 AP1G2O75843 785 aa20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 PAPSS2O95340 614 aaPredicted RBP20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 ZDHHC11BP0C7U3 371 aa20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 CCR3P51677 355 aa20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 SLC5A3P53794 718 aa20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 FKBP3Q00688 224 aaKnown RBP20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 SATB1Q01826 763 aa20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 SNX30Q5VWJ9 437 aa20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 FSTL4Q6MZW2 842 aa20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 SYNPOQ8N3V7 929 aa20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 FAXDC2Q96IV6 333 aa20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 HNRNPABQ99729 332 aaKnown RBP20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 FAM126AQ9BYI3 521 aaPredicted RBP20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 GTPBP4Q9BZE4 634 aaKnown RBP20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 COMMD8Q9NX08 183 aa20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 HOOK1Q9UJC3 728 aaKnown RBP20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 MAN1B1Q9UKM7 699 aa20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 WNT6Q9Y6F9 365 aa20.06■□□□□ 0.8
HMGB3P22-201ENST00000442010 SPTBN4Q9H254 2564 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 LEFTY2O00292 366 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 CD44P16070 742 aaKnown RBP20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 BMP6P22004 513 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 GJA4P35212 333 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 MXI1P50539 228 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 LRRC63Q05C16 580 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 IFRD2Q12894 506 aaPredicted RBP20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 KIAA1958Q8N8K9 716 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 FBXL13Q8NEE6 735 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 PDZD8Q8NEN9 1154 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 FBXO32Q969P5 355 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 TSG101Q99816 390 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 NT5C1AQ9BXI3 368 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 LINC00597Q9H2U6 94 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 FBRSL1Q9HCM7 1045 aaKnown RBP20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 FAM49BQ9NUQ9 324 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 C2orf42Q9NWW7 574 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 RAB20Q9NX57 234 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 COQ4Q9Y3A0 265 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 WDR87Q6ZQQ6 2873 aa20.05■□□□□ 0.8
HMGB3P22-201ENST00000442010 EML5Q05BV3 1969 aa20.04■□□□□ 0.8
HMGB3P22-201ENST00000442010 HHLA1C9JL84 531 aa20.04■□□□□ 0.8
HMGB3P22-201ENST00000442010 KINO60870 393 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms