RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 YWHAEP62258 255 aaKnown RBP19.33■□□□□ 0.68
SMPD4-210ENST00000441135 KCNH2Q12809 1159 aa19.33■□□□□ 0.68
SMPD4-210ENST00000441135 LRRC32Q14392 662 aa19.33■□□□□ 0.68
SMPD4-210ENST00000441135 SMYD5Q6GMV2 418 aa19.33■□□□□ 0.68
SMPD4-210ENST00000441135 MAMSTRQ6ZN01 415 aa19.33■□□□□ 0.68
SMPD4-210ENST00000441135 IRF2BP1Q8IU81 584 aa19.33■□□□□ 0.68
SMPD4-210ENST00000441135 USP13Q92995 863 aaPredicted RBP19.33■□□□□ 0.68
SMPD4-210ENST00000441135 ELMO3Q96BJ8 720 aa19.33■□□□□ 0.68
SMPD4-210ENST00000441135 ZFYVE19Q96K21 471 aa19.33■□□□□ 0.68
SMPD4-210ENST00000441135 NT5C1AQ9BXI3 368 aa19.33■□□□□ 0.68
SMPD4-210ENST00000441135 PRMT8Q9NR22 394 aaPredicted RBP19.33■□□□□ 0.68
SMPD4-210ENST00000441135 R4GN57 208 aa19.33■□□□□ 0.68
SMPD4-210ENST00000441135 TICRRQ7Z2Z1 1910 aa19.33■□□□□ 0.68
SMPD4-210ENST00000441135 TRAV19A0A0A6YYK7 116 aa19.32■□□□□ 0.68
SMPD4-210ENST00000441135 SPECC1L-ADORA2AF8WAN1 911 aa19.32■□□□□ 0.68
SMPD4-210ENST00000441135 PDE6CP51160 858 aa19.32■□□□□ 0.68
SMPD4-210ENST00000441135 CUL2Q13617 745 aa19.32■□□□□ 0.68
SMPD4-210ENST00000441135 TPD52L1Q16890 204 aaPredicted RBP19.32■□□□□ 0.68
SMPD4-210ENST00000441135 ITPRIPL2Q3MIP1 535 aa19.32■□□□□ 0.68
SMPD4-210ENST00000441135 DENND5BQ6ZUT9 1274 aa19.32■□□□□ 0.68
SMPD4-210ENST00000441135 LMO3Q8TAP4 145 aa19.32■□□□□ 0.68
SMPD4-210ENST00000441135 ENOX1Q8TC92 643 aaKnown RBP19.32■□□□□ 0.68
SMPD4-210ENST00000441135 B3GNT5Q9BYG0 378 aa19.32■□□□□ 0.68
SMPD4-210ENST00000441135 ANO10Q9NW15 660 aa19.32■□□□□ 0.68
SMPD4-210ENST00000441135 GTSE1Q9NYZ3 720 aa19.32■□□□□ 0.68
SMPD4-210ENST00000441135 GTPBP10A4D1E9 387 aaKnown RBP19.31■□□□□ 0.68
SMPD4-210ENST00000441135 LMNAP02545 664 aaKnown RBP19.31■□□□□ 0.68
SMPD4-210ENST00000441135 CKMP06732 381 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 USP17L7P0C7H9 530 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 CSTF1Q05048 431 aaKnown RBP19.31■□□□□ 0.68
SMPD4-210ENST00000441135 MTAPQ13126 283 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 PPP2R5DQ14738 602 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 STX1AQ16623 288 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 CC2D1AQ6P1N0 951 aaPredicted RBP19.31■□□□□ 0.68
SMPD4-210ENST00000441135 SASS6Q6UVJ0 657 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 ACOT1Q86TX2 421 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 FAM35AQ86V20 835 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 WHAMMQ8TF30 809 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 SMARCD1Q96GM5 515 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 NT5C1BQ96P26 610 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 FAM83CQ9BQN1 747 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 TTLL2Q9BWV7 592 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 ZNF518BQ9C0D4 1074 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 LMAN1LQ9HAT1 526 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 TRPC7Q9HCX4 862 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 CISHQ9NSE2 258 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 HMGXB4Q9UGU5 601 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 CCL26Q9Y258 94 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 PCDHGA2Q9Y5H1 932 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 GREB1Q4ZG55 1949 aa19.31■□□□□ 0.68
SMPD4-210ENST00000441135 PATJQ8NI35 1801 aa19.3■□□□□ 0.68
SMPD4-210ENST00000441135 USP34Q70CQ2 3546 aa19.3■□□□□ 0.68
SMPD4-210ENST00000441135 F8VP50 259 aa19.3■□□□□ 0.68
SMPD4-210ENST00000441135 CHRNB1P11230 501 aa19.3■□□□□ 0.68
SMPD4-210ENST00000441135 PFKLP17858 780 aa19.3■□□□□ 0.68
SMPD4-210ENST00000441135 SOX9P48436 509 aa19.3■□□□□ 0.68
SMPD4-210ENST00000441135 TNK2Q07912 1038 aa19.3■□□□□ 0.68
SMPD4-210ENST00000441135 PDGFRLQ15198 375 aa19.3■□□□□ 0.68
SMPD4-210ENST00000441135 PAQR9Q6ZVX9 377 aa19.3■□□□□ 0.68
SMPD4-210ENST00000441135 FUKQ8N0W3 1084 aa19.3■□□□□ 0.68
SMPD4-210ENST00000441135 TATDN2Q93075 761 aa19.3■□□□□ 0.68
SMPD4-210ENST00000441135 TWNKQ96RR1 684 aa19.3■□□□□ 0.68
SMPD4-210ENST00000441135 HNRNPABQ99729 332 aaKnown RBP19.3■□□□□ 0.68
SMPD4-210ENST00000441135 FAM126AQ9BYI3 521 aaPredicted RBP19.3■□□□□ 0.68
SMPD4-210ENST00000441135 DMAP1Q9NPF5 467 aaPredicted RBP19.3■□□□□ 0.68
SMPD4-210ENST00000441135 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.3■□□□□ 0.686e-6■■■■■ 48.1
SMPD4-210ENST00000441135 GKN1Q9NS71 199 aa19.3■□□□□ 0.68
SMPD4-210ENST00000441135 VPS13AQ96RL7 3174 aa19.3■□□□□ 0.68
SMPD4-210ENST00000441135 RIF1Q5UIP0 2472 aaKnown RBP19.3■□□□□ 0.68
SMPD4-210ENST00000441135 DENND4CQ5VZ89 1909 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 PPP3CCP48454 512 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 CCR3P51677 355 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 GCNT1Q02742 428 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 MAN2A1Q16706 1144 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 DGKKQ5KSL6 1271 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 UBR7Q8N806 425 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 EHBP1Q8NDI1 1231 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 JAKMIP2Q96AA8 810 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 FAM81BQ96LP2 452 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 CSNK1G1Q9HCP0 422 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 COMMD8Q9NX08 183 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 ZSCAN32Q9NX65 697 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 TRPM5Q9NZQ8 1165 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 TMEM63CQ9P1W3 806 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 CACNA1IQ9P0X4 2223 aa19.29■□□□□ 0.68
SMPD4-210ENST00000441135 CD58P19256 250 aa19.28■□□□□ 0.68
SMPD4-210ENST00000441135 EEF1GP26641 437 aaKnown RBP19.28■□□□□ 0.68
SMPD4-210ENST00000441135 AMPD2Q01433 879 aa19.28■□□□□ 0.68
SMPD4-210ENST00000441135 USP4Q13107 963 aa19.28■□□□□ 0.68
SMPD4-210ENST00000441135 RUNX3Q13761 415 aa19.28■□□□□ 0.68
SMPD4-210ENST00000441135 MTF1Q14872 753 aa19.28■□□□□ 0.68
SMPD4-210ENST00000441135 KLHL40Q2TBA0 621 aa19.28■□□□□ 0.68
SMPD4-210ENST00000441135 TXNDC11Q6PKC3 985 aa19.28■□□□□ 0.68
SMPD4-210ENST00000441135 TTC8Q8TAM2 541 aa19.28■□□□□ 0.68
SMPD4-210ENST00000441135 ATRIPQ8WXE1 791 aa19.28■□□□□ 0.68
SMPD4-210ENST00000441135 NELL1Q92832 810 aa19.28■□□□□ 0.68
SMPD4-210ENST00000441135 TMEM176AQ96HP8 235 aa19.28■□□□□ 0.68
SMPD4-210ENST00000441135 ARID3AQ99856 593 aa19.28■□□□□ 0.68
SMPD4-210ENST00000441135 PNPLA8Q9NP80 782 aa19.28■□□□□ 0.68
SMPD4-210ENST00000441135 TMEM30AQ9NV96 361 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms