RNA–Protein interactions for RNA: ENST00000440902.2

LYSMD1-202, Transcript of LysM domain containing 1, humanhuman

TSL 2 BASIC

Gene LYSMD1, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-202ENST00000440902 C12orf40Q86WS4 652 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 ALLCQ8N6M5 410 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 RDH13Q8NBN7 331 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 TXNDC5Q8NBS9 432 aaKnown RBP8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 OR6B3Q8NGW1 331 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 CCDC26Q8TAB7 109 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 MYCBPAPQ8TBZ2 947 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 RLN3Q8WXF3 142 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 PIGKQ92643 395 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 CNOT6LQ96LI5 555 aaKnown RBP8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 USP28Q96RU2 1077 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 RNF38Q9H0F5 515 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 DPEP3Q9H4B8 488 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 ZDHHC4Q9NPG8 344 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 TMEM9BQ9NQ34 198 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 HSPBP1Q9NZL4 362 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 BCCIPQ9P287 314 aaKnown RBP eCLIP8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 CFAP97Q9P2B7 532 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 RALYQ9UKM9 306 aaKnown RBP8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 MMP17Q9ULZ9 603 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 NME7Q9Y5B8 376 aa8.57□□□□□ -1.04
LYSMD1-202ENST00000440902 ATXN2Q99700 1313 aaKnown RBP8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 USP24Q9UPU5 2620 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 CNOT1A5YKK6 2376 aaKnown RBP8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 CHD8Q9HCK8 2581 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 ZNF840PA6NDX5 716 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 C1QTNF9BB2RNN3 333 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 CLDN5O00501 218 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 CLIC2O15247 247 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 MAP3K13O43283 966 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 ALDH1A2O94788 518 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 OAS1P00973 400 aaKnown RBP8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 APODP05090 189 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 C1QTNF9P0C862 333 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 MBL2P11226 248 aaPredicted RBP8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 PFKLP17858 780 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 TNNI1P19237 187 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 SYT1P21579 422 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 HOXD13P35453 343 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 GNL1P36915 607 aaPredicted RBP8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 CYP2J2P51589 502 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 CACNA2D1P54289 1103 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 TNNC1P63316 161 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 NOP14P78316 857 aaKnown RBP8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 ASIC1P78348 528 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 SLC7A9P82251 487 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 MESP2Q0VG99 397 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 TAF10Q12962 218 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 CUL4AQ13619 759 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 DHCR24Q15392 516 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 CRY1Q16526 586 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 TDRD10Q5VZ19 366 aaKnown RBP8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 TRAPPC11Q7Z392 1133 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 LIMS2Q7Z4I7 341 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 WDR49Q8IV35 697 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 PGBD3Q8N328 593 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 HMGB4Q8WW32 186 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 FBXO32Q969P5 355 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 SPACA7Q96KW9 195 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 SLITRK1Q96PX8 696 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 FNBP1Q96RU3 617 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 PNKPQ96T60 521 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 CGRRF1Q99675 332 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 TTLL2Q9BWV7 592 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 ZNF518BQ9C0D4 1074 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 TMEM30AQ9NV96 361 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 EHD2Q9NZN4 543 aa8.56□□□□□ -1.04
LYSMD1-202ENST00000440902 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 TCRBV21S2A2A0A5A6 115 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 SGK1O00141 431 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 SLC9A3R1O14745 358 aaPredicted RBP8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 KAT7O95251 611 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 OLFM2O95897 454 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 TOP3BO95985 862 aaKnown RBP8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 ADH1CP00326 375 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 CST3P01034 146 aaPredicted RBP8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 PROS1P07225 676 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 IRF1P10914 325 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 ADH5P11766 374 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 PTPN1P18031 435 aaKnown RBP8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 PPP3CCP48454 512 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 IRX4P78413 519 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 MRPS21P82921 87 aaKnown RBP8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 TRPC3Q13507 836 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 SLC39A14Q15043 492 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 STK38Q15208 465 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 SNRNP35Q16560 246 aaKnown RBP8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 WDR72Q3MJ13 1102 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 TRIM61Q5EBN2 209 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 EMC10Q5UCC4 262 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 UNQ6494/PRO21346Q6UXR6 183 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 LPCAT2Q7L5N7 544 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 DDX42Q86XP3 938 aaKnown RBP eCLIP8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 NELFCDQ8IXH7 590 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 TMEFF1Q8IYR6 380 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 ADGRG2Q8IZP9 1017 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 FRMD1Q8N878 549 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 NAT16Q8N8M0 369 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 IL17RCQ8NAC3 791 aa8.55□□□□□ -1.04
LYSMD1-202ENST00000440902 DEFB124Q8NES8 71 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms