RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 CYFIP2Q96F07 1278 aa14.56□□□□□ -0.08
LTBR-202ENST00000440421 NELL2Q99435 816 aa14.56□□□□□ -0.08
LTBR-202ENST00000440421 HNRNPABQ99729 332 aaKnown RBP14.56□□□□□ -0.08
LTBR-202ENST00000440421 SRRTQ9BXP5 876 aaKnown RBP14.56□□□□□ -0.08
LTBR-202ENST00000440421 OSBPL6Q9BZF3 934 aa14.56□□□□□ -0.08
LTBR-202ENST00000440421 IRF2BPLQ9H1B7 796 aa14.56□□□□□ -0.08
LTBR-202ENST00000440421 CLSTN2Q9H4D0 955 aa14.56□□□□□ -0.08
LTBR-202ENST00000440421 CISHQ9NSE2 258 aa14.56□□□□□ -0.08
LTBR-202ENST00000440421 COQ4Q9Y3A0 265 aa14.56□□□□□ -0.08
LTBR-202ENST00000440421 WDFY4Q6ZS81 3184 aa14.55□□□□□ -0.08
LTBR-202ENST00000440421 SPECC1L-ADORA2AF8WAN1 911 aa14.55□□□□□ -0.08
LTBR-202ENST00000440421 TNFRSF10BO14763 440 aa14.55□□□□□ -0.08
LTBR-202ENST00000440421 NCAM2O15394 837 aa14.55□□□□□ -0.08
LTBR-202ENST00000440421 PPP3CCP48454 512 aa14.55□□□□□ -0.08
LTBR-202ENST00000440421 ZNF268Q14587 947 aaPredicted RBP14.55□□□□□ -0.08
LTBR-202ENST00000440421 MTF1Q14872 753 aa14.55□□□□□ -0.08
LTBR-202ENST00000440421 FOXR2Q6PJQ5 311 aa14.55□□□□□ -0.08
LTBR-202ENST00000440421 SH3RF2Q8TEC5 729 aa14.55□□□□□ -0.08
LTBR-202ENST00000440421 FAXDC2Q96IV6 333 aa14.55□□□□□ -0.08
LTBR-202ENST00000440421 HEXIM2Q96MH2 286 aaKnown RBP14.55□□□□□ -0.08
LTBR-202ENST00000440421 DNAI2Q9GZS0 605 aa14.55□□□□□ -0.08
LTBR-202ENST00000440421 EBF3Q9H4W6 596 aa14.55□□□□□ -0.08
LTBR-202ENST00000440421 C8orf33Q9H7E9 229 aaPredicted RBP14.55□□□□□ -0.08
LTBR-202ENST00000440421 CSNK1G1Q9HCP0 422 aa14.55□□□□□ -0.08
LTBR-202ENST00000440421 SPATA6Q9NWH7 488 aaPredicted RBP14.55□□□□□ -0.08
LTBR-202ENST00000440421 CHORDC1Q9UHD1 332 aaPredicted RBP14.55□□□□□ -0.08
LTBR-202ENST00000440421 KIF26AQ9ULI4 1882 aaPredicted RBP14.55□□□□□ -0.08
LTBR-202ENST00000440421 MYH10P35580 1976 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 GNA14O95837 355 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 ARSAP15289 507 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 CTHP32929 405 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 PDE6CP51160 858 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 RAD23BP54727 409 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 FZD5Q13467 585 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 CUL2Q13617 745 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 RUNX3Q13761 415 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 ZNF77Q15935 545 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 ITPRIPL2Q3MIP1 535 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 PPP1R26Q5T8A7 1209 aaPredicted RBP14.54□□□□□ -0.08
LTBR-202ENST00000440421 TXNDC11Q6PKC3 985 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 CLEC17AQ6ZS10 378 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 CLEC20AQ6ZU45 233 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 GPRIN1Q7Z2K8 1008 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 CREBRFQ8IUR6 639 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 C1orf210Q8IVY1 113 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 TTC39CQ8N584 583 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 SLC4A11Q8NBS3 891 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 PDZD8Q8NEN9 1154 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 TMEM176AQ96HP8 235 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 FAM83CQ9BQN1 747 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 RNF38Q9H0F5 515 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 NUP62CLQ9H1M0 184 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 HPS4Q9NQG7 708 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 LMBRD1Q9NUN5 540 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 SMPD4Q9NXE4 827 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 GMIPQ9P107 970 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 RWDD2AQ9UIY3 292 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 ARHGAP26Q9UNA1 814 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 WNT6Q9Y6F9 365 aa14.54□□□□□ -0.08
LTBR-202ENST00000440421 FGFR1OPO95684 399 aaKnown RBP14.53□□□□□ -0.08
LTBR-202ENST00000440421 OAS1P00973 400 aaKnown RBP14.53□□□□□ -0.08
LTBR-202ENST00000440421 CCDC192P0DO97 292 aa14.53□□□□□ -0.08
LTBR-202ENST00000440421 MLLT6P55198 1093 aaPredicted RBP14.53□□□□□ -0.08
LTBR-202ENST00000440421 ZXDBP98169 803 aa14.53□□□□□ -0.08
LTBR-202ENST00000440421 USP4Q13107 963 aa14.53□□□□□ -0.08
LTBR-202ENST00000440421 ALYREFQ86V81 257 aaKnown RBP14.53□□□□□ -0.08
LTBR-202ENST00000440421 RALGPS2Q86X27 583 aaPredicted RBP14.53□□□□□ -0.08
LTBR-202ENST00000440421 TRIM59Q8IWR1 403 aa14.53□□□□□ -0.08
LTBR-202ENST00000440421 ZNF687Q8N1G0 1237 aa14.53□□□□□ -0.08
LTBR-202ENST00000440421 CLDN23Q96B33 292 aa14.53□□□□□ -0.08
LTBR-202ENST00000440421 MSANTD3Q96H12 275 aa14.53□□□□□ -0.08
LTBR-202ENST00000440421 NT5C1BQ96P26 610 aa14.53□□□□□ -0.08
LTBR-202ENST00000440421 LMAN1LQ9HAT1 526 aa14.53□□□□□ -0.08
LTBR-202ENST00000440421 COMMD8Q9NX08 183 aa14.53□□□□□ -0.08
LTBR-202ENST00000440421 DUS2Q9NX74 493 aaKnown RBP14.53□□□□□ -0.08
LTBR-202ENST00000440421 IL37Q9NZH6 218 aa14.53□□□□□ -0.08
LTBR-202ENST00000440421 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.53□□□□□ -0.08
LTBR-202ENST00000440421 HELZP42694 1942 aaKnown RBP14.53□□□□□ -0.08
LTBR-202ENST00000440421 OTOL1A6NHN0 477 aaPredicted RBP14.52□□□□□ -0.09
LTBR-202ENST00000440421 HHLA1C9JL84 531 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 LEFTY2O00292 366 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 SCAMP3O14828 347 aaKnown RBP14.52□□□□□ -0.09
LTBR-202ENST00000440421 COCHO43405 550 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 OLFM2O95897 454 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 MBL2P11226 248 aaPredicted RBP14.52□□□□□ -0.09
LTBR-202ENST00000440421 PFKLP17858 780 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 ACO1P21399 889 aaKnown RBP14.52□□□□□ -0.09
LTBR-202ENST00000440421 RPS9P46781 194 aaKnown RBP14.52□□□□□ -0.09
LTBR-202ENST00000440421 IFNAR2P48551 515 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 PGFP49763 221 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 SLC7A9P82251 487 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 CETN1Q12798 172 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 KCNH2Q12809 1159 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 PON2Q15165 354 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 PDGFRLQ15198 375 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 MLKLQ8NB16 471 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 OSCP1Q8WVF1 389 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 OVCA2Q8WZ82 227 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 IPO9Q96P70 1041 aaKnown RBP14.52□□□□□ -0.09
LTBR-202ENST00000440421 GBP4Q96PP9 640 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms