RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 FAM49BQ9NUQ9 324 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 ARHGAP26Q9UNA1 814 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 WNT6Q9Y6F9 365 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 ATG2BQ96BY7 2078 aa21.08■□□□□ 0.96
SHROOM1-204ENST00000440118 ZNF840PA6NDX5 716 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 CCDC130P13994 396 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 CD58P19256 250 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 CXCL12P48061 93 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 MXI1P50539 228 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 NRLP54845 237 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 ENPEPQ07075 957 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 PPP3CAQ08209 521 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 ZCWPW2Q504Y3 356 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 DCAF17Q5H9S7 520 aaPredicted RBP21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 C1orf220Q5T0J3 134 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 TCERG1LQ5VWI1 586 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 Q6ZS52 159 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 UNC93AQ86WB7 457 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 SPEM1Q8N4L4 309 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 PDZD8Q8NEN9 1154 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 RIN3Q8TB24 985 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 SLC2A14Q8TDB8 520 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 TAS1R2Q8TE23 839 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 OSCP1Q8WVF1 389 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 GTPBP4Q9BZE4 634 aaKnown RBP21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 GCNT4Q9P109 453 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 HMGXB4Q9UGU5 601 aa21.07■□□□□ 0.96
SHROOM1-204ENST00000440118 MBL2P11226 248 aaPredicted RBP21.06■□□□□ 0.96
SHROOM1-204ENST00000440118 PRCPP42785 496 aa21.06■□□□□ 0.96
SHROOM1-204ENST00000440118 SATB1Q01826 763 aa21.06■□□□□ 0.96
SHROOM1-204ENST00000440118 NR1H3Q13133 447 aa21.06■□□□□ 0.96
SHROOM1-204ENST00000440118 KRT39Q6A163 491 aa21.06■□□□□ 0.96
SHROOM1-204ENST00000440118 ERCC4Q92889 916 aaPredicted RBP21.06■□□□□ 0.96
SHROOM1-204ENST00000440118 KCNK16Q96T55 309 aa21.06■□□□□ 0.96
SHROOM1-204ENST00000440118 NACA2Q9H009 215 aa21.06■□□□□ 0.96
SHROOM1-204ENST00000440118 TMEM30AQ9NV96 361 aa21.06■□□□□ 0.96
SHROOM1-204ENST00000440118 SMPD4Q9NXE4 827 aa21.06■□□□□ 0.96
SHROOM1-204ENST00000440118 FAM200BP0CF97 657 aa21.05■□□□□ 0.96
SHROOM1-204ENST00000440118 ADORA2BP29275 332 aa21.05■□□□□ 0.96
SHROOM1-204ENST00000440118 GTF2H1P32780 548 aa21.05■□□□□ 0.96
SHROOM1-204ENST00000440118 SLC5A3P53794 718 aa21.05■□□□□ 0.96
SHROOM1-204ENST00000440118 SYNPOQ8N3V7 929 aa21.05■□□□□ 0.96
SHROOM1-204ENST00000440118 TIGD1Q96MW7 591 aa21.05■□□□□ 0.96
SHROOM1-204ENST00000440118 NT5C1AQ9BXI3 368 aa21.05■□□□□ 0.96
SHROOM1-204ENST00000440118 ECT2Q9H8V3 914 aa21.05■□□□□ 0.96
SHROOM1-204ENST00000440118 CYP3A43Q9HB55 503 aa21.05■□□□□ 0.96
SHROOM1-204ENST00000440118 NCDNQ9UBB6 729 aa21.05■□□□□ 0.96
SHROOM1-204ENST00000440118 PCDHA5Q9Y5H7 936 aa21.05■□□□□ 0.96
SHROOM1-204ENST00000440118 CPQQ9Y646 472 aa21.05■□□□□ 0.96
SHROOM1-204ENST00000440118 LEFTY2O00292 366 aa21.04■□□□□ 0.96
SHROOM1-204ENST00000440118 PSMA7O14818 248 aa21.04■□□□□ 0.96
SHROOM1-204ENST00000440118 NFATC1O95644 943 aa21.04■□□□□ 0.96
SHROOM1-204ENST00000440118 CCINQ13939 588 aa21.04■□□□□ 0.96
SHROOM1-204ENST00000440118 FUKQ8N0W3 1084 aa21.04■□□□□ 0.96
SHROOM1-204ENST00000440118 ENGASEQ8NFI3 743 aa21.04■□□□□ 0.96
SHROOM1-204ENST00000440118 OVCA2Q8WZ82 227 aa21.04■□□□□ 0.96
SHROOM1-204ENST00000440118 SECISBP2LQ93073 1101 aaKnown RBP21.04■□□□□ 0.96
SHROOM1-204ENST00000440118 JAKMIP2Q96AA8 810 aa21.04■□□□□ 0.96
SHROOM1-204ENST00000440118 P2RY13Q9BPV8 354 aa21.04■□□□□ 0.96
SHROOM1-204ENST00000440118 RAB23Q9ULC3 237 aa21.04■□□□□ 0.96
SHROOM1-204ENST00000440118 SPTBN4Q9H254 2564 aa21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 OTOGLQ3ZCN5 2332 aa21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 OTOL1A6NHN0 477 aaPredicted RBP21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 SLC16A3O15427 465 aaKnown RBP21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 GJA4P35212 333 aa21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 MAP3K7CLP57077 242 aa21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 FKBP3Q00688 224 aaKnown RBP21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 LRRC63Q05C16 580 aa21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 WDR44Q5JSH3 913 aa21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 DDX42Q86XP3 938 aaKnown RBP eCLIP21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 C12orf29Q8N999 325 aa21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 ZBTB44Q8NCP5 570 aa21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 FBXL13Q8NEE6 735 aa21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 SCAMP5Q8TAC9 235 aa21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 RUBCNQ92622 972 aa21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 APOBEC3GQ9HC16 384 aaKnown RBP21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 SMG5Q9UPR3 1016 aaKnown RBP21.03■□□□□ 0.96
SHROOM1-204ENST00000440118 SLC9A3R1O14745 358 aaPredicted RBP21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 OAS1P00973 400 aaKnown RBP21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 TCF3P15923 654 aa21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 SLC7A9P82251 487 aa21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 INCA1Q0VD86 236 aa21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 GAS6Q14393 721 aa21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 EML3Q32P44 896 aa21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 TMEM196Q5HYL7 178 aa21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 HECTD3Q5T447 861 aa21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 HEATR6Q6AI08 1181 aaKnown RBP21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 MAMSTRQ6ZN01 415 aa21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 CRYBG2Q8N1P7 616 aa21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 FBXO44Q9H4M3 255 aa21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 GMIPQ9P107 970 aa21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 CFAP97Q9P2B7 532 aa21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 ZNF292O60281 2723 aa21.02■□□□□ 0.96
SHROOM1-204ENST00000440118 TRIM49BA6NDI0 452 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 TRDMT1O14717 391 aaKnown RBP21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 SCAMP3O14828 347 aaKnown RBP21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 ATG13O75143 517 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 DRD1P21728 446 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 COBLL1Q53SF7 1204 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 ISM2Q6H9L7 571 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms