RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 USP17L7P0C7H9 530 aa25.04■■□□□ 1.6
VARS-217ENST00000440048 PPP3CCP48454 512 aa25.04■■□□□ 1.6
VARS-217ENST00000440048 SLC5A3P53794 718 aa25.04■■□□□ 1.6
VARS-217ENST00000440048 CETN1Q12798 172 aa25.04■■□□□ 1.6
VARS-217ENST00000440048 PPP1R26Q5T8A7 1209 aaPredicted RBP25.04■■□□□ 1.6
VARS-217ENST00000440048 ARL14EPQ8N8R7 260 aaPredicted RBP25.04■■□□□ 1.6
VARS-217ENST00000440048 LMO3Q8TAP4 145 aa25.04■■□□□ 1.6
VARS-217ENST00000440048 TMEM176AQ96HP8 235 aa25.04■■□□□ 1.6
VARS-217ENST00000440048 CNOT6LQ96LI5 555 aaKnown RBP25.04■■□□□ 1.6
VARS-217ENST00000440048 NT5C1BQ96P26 610 aa25.04■■□□□ 1.6
VARS-217ENST00000440048 SLITRK1Q96PX8 696 aa25.04■■□□□ 1.6
VARS-217ENST00000440048 KIF9Q9HAQ2 790 aa25.04■■□□□ 1.6
VARS-217ENST00000440048 IL37Q9NZH6 218 aa25.04■■□□□ 1.6
VARS-217ENST00000440048 SIT1Q9Y3P8 196 aa25.04■■□□□ 1.6
VARS-217ENST00000440048 HELZP42694 1942 aaKnown RBP25.04■■□□□ 1.6
VARS-217ENST00000440048 HDCP19113 662 aa25.03■■□□□ 1.6
VARS-217ENST00000440048 CD72P21854 359 aa25.03■■□□□ 1.6
VARS-217ENST00000440048 TBXAS1P24557 533 aaPredicted RBP25.03■■□□□ 1.6
VARS-217ENST00000440048 CLEC20AQ6ZU45 233 aa25.03■■□□□ 1.6
VARS-217ENST00000440048 IRF2BP1Q8IU81 584 aa25.03■■□□□ 1.6
VARS-217ENST00000440048 PJA1Q8NG27 643 aa25.03■■□□□ 1.6
VARS-217ENST00000440048 RIN3Q8TB24 985 aa25.03■■□□□ 1.6
VARS-217ENST00000440048 FBXO32Q969P5 355 aa25.03■■□□□ 1.6
VARS-217ENST00000440048 THG1LQ9NWX6 298 aaKnown RBP25.03■■□□□ 1.6
VARS-217ENST00000440048 COMMD8Q9NX08 183 aa25.03■■□□□ 1.6
VARS-217ENST00000440048 SHISA7A6NL88 538 aa25.02■■□□□ 1.6
VARS-217ENST00000440048 ABL1P00519 1130 aa25.02■■□□□ 1.6
VARS-217ENST00000440048 PFKLP17858 780 aa25.02■■□□□ 1.6
VARS-217ENST00000440048 YWHAEP62258 255 aaKnown RBP25.02■■□□□ 1.6
VARS-217ENST00000440048 TCF15Q12870 199 aa25.02■■□□□ 1.6
VARS-217ENST00000440048 CREBRFQ8IUR6 639 aa25.02■■□□□ 1.6
VARS-217ENST00000440048 UBR7Q8N806 425 aa25.02■■□□□ 1.6
VARS-217ENST00000440048 EHBP1Q8NDI1 1231 aa25.02■■□□□ 1.6
VARS-217ENST00000440048 CSGALNACT1Q8TDX6 532 aa25.02■■□□□ 1.6
VARS-217ENST00000440048 DACH1Q9UI36 760 aa25.02■■□□□ 1.6
VARS-217ENST00000440048 MTF2Q9Y483 593 aaPredicted RBP25.02■■□□□ 1.6
VARS-217ENST00000440048 DCNP07585 359 aaKnown RBP25.01■■□□□ 1.59
VARS-217ENST00000440048 ERCC5P28715 1186 aaPredicted RBP25.01■■□□□ 1.59
VARS-217ENST00000440048 PDE6CP51160 858 aa25.01■■□□□ 1.59
VARS-217ENST00000440048 PLCB2Q00722 1185 aa25.01■■□□□ 1.59
VARS-217ENST00000440048 UBXN2BQ14CS0 331 aa25.01■■□□□ 1.59
VARS-217ENST00000440048 TPD52L1Q16890 204 aaPredicted RBP25.01■■□□□ 1.59
VARS-217ENST00000440048 ZNF852Q6ZMS4 543 aa25.01■■□□□ 1.59
VARS-217ENST00000440048 PDZD8Q8NEN9 1154 aa25.01■■□□□ 1.59
VARS-217ENST00000440048 OVCA2Q8WZ82 227 aa25.01■■□□□ 1.59
VARS-217ENST00000440048 DUSP16Q9BY84 665 aa25.01■■□□□ 1.59
VARS-217ENST00000440048 LTB4R2Q9NPC1 389 aa25.01■■□□□ 1.59
VARS-217ENST00000440048 GKN1Q9NS71 199 aa25.01■■□□□ 1.59
VARS-217ENST00000440048 CHORDC1Q9UHD1 332 aaPredicted RBP25.01■■□□□ 1.59
VARS-217ENST00000440048 PIAS3Q9Y6X2 628 aa25.01■■□□□ 1.59
VARS-217ENST00000440048 FAM92AA1XBS5 289 aa25■■□□□ 1.59
VARS-217ENST00000440048 FAM170BA6NMN3 283 aa25■■□□□ 1.59
VARS-217ENST00000440048 HHLA1C9JL84 531 aa25■■□□□ 1.59
VARS-217ENST00000440048 GPRIN1Q7Z2K8 1008 aa25■■□□□ 1.59
VARS-217ENST00000440048 CCDC105Q8IYK2 499 aa25■■□□□ 1.59
VARS-217ENST00000440048 PPM1KQ8N3J5 372 aa25■■□□□ 1.59
VARS-217ENST00000440048 JAKMIP2Q96AA8 810 aa25■■□□□ 1.59
VARS-217ENST00000440048 RNF38Q9H0F5 515 aa25■■□□□ 1.59
VARS-217ENST00000440048 DLGAP2Q9P1A6 1054 aa25■■□□□ 1.59
VARS-217ENST00000440048 ARHGAP26Q9UNA1 814 aa25■■□□□ 1.59
VARS-217ENST00000440048 MYO16Q9Y6X6 1858 aa25■■□□□ 1.59
VARS-217ENST00000440048 MAN2B1O00754 1011 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 OAS1P00973 400 aaKnown RBP24.99■■□□□ 1.59
VARS-217ENST00000440048 GLULP15104 373 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 TARSP26639 723 aaKnown RBP24.99■■□□□ 1.59
VARS-217ENST00000440048 MLLT6P55198 1093 aaPredicted RBP24.99■■□□□ 1.59
VARS-217ENST00000440048 TNK2Q07912 1038 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 USP4Q13107 963 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 ZNF77Q15935 545 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 ARHGAP17Q68EM7 881 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 RBM43Q6ZSC3 357 aaKnown RBP24.99■■□□□ 1.59
VARS-217ENST00000440048 ARHGEF19Q8IW93 802 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 DTWD2Q8NBA8 298 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 TTC8Q8TAM2 541 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 KAT5Q92993 513 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 FAM83CQ9BQN1 747 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 OSBPL6Q9BZF3 934 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 INTS2Q9H0H0 1204 aaKnown RBP24.99■■□□□ 1.59
VARS-217ENST00000440048 FBXO44Q9H4M3 255 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 THAP9Q9H5L6 903 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 PNPLA8Q9NP80 782 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 GTSE1Q9NYZ3 720 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 GMIPQ9P107 970 aa24.99■■□□□ 1.59
VARS-217ENST00000440048 ZFHX2Q9C0A1 2572 aaPredicted RBP24.98■■□□□ 1.59
VARS-217ENST00000440048 OLFM2O95897 454 aa24.98■■□□□ 1.59
VARS-217ENST00000440048 ACO1P21399 889 aaKnown RBP24.98■■□□□ 1.59
VARS-217ENST00000440048 KPNA1P52294 538 aaPredicted RBP24.98■■□□□ 1.59
VARS-217ENST00000440048 MTF1Q14872 753 aa24.98■■□□□ 1.59
VARS-217ENST00000440048 SNX30Q5VWJ9 437 aa24.98■■□□□ 1.59
VARS-217ENST00000440048 CC2D1AQ6P1N0 951 aaPredicted RBP24.98■■□□□ 1.59
VARS-217ENST00000440048 RRAGAQ7L523 313 aa24.98■■□□□ 1.59
VARS-217ENST00000440048 TTC16Q8NEE8 873 aa24.98■■□□□ 1.59
VARS-217ENST00000440048 SH3RF2Q8TEC5 729 aa24.98■■□□□ 1.59
VARS-217ENST00000440048 NELL2Q99435 816 aa24.98■■□□□ 1.59
VARS-217ENST00000440048 MRPS17Q9Y2R5 130 aaKnown RBP24.98■■□□□ 1.59
VARS-217ENST00000440048 ZDHHC11BP0C7U3 371 aa24.97■■□□□ 1.59
VARS-217ENST00000440048 TCF3P15923 654 aa24.97■■□□□ 1.59
VARS-217ENST00000440048 MTIF2P46199 727 aaKnown RBP24.97■■□□□ 1.59
VARS-217ENST00000440048 SOX9P48436 509 aa24.97■■□□□ 1.59
VARS-217ENST00000440048 SLC7A9P82251 487 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms