RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 TRNP1Q6NT89 227 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 DARS2Q6PI48 645 aaKnown RBP12.68□□□□□ -0.38
HDAC8-214ENST00000439122 LCLAT1Q6UWP7 414 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 PARP9Q8IXQ6 854 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 PALM2Q8IXS6 379 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 PDIK1LQ8N165 341 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 FBXO36Q8NEA4 188 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.68□□□□□ -0.38
HDAC8-214ENST00000439122 PPCSQ9HAB8 311 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 VTA1Q9NP79 307 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 KLHL14Q9P2G3 628 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 RABGEF1Q9UJ41 708 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 SMG5Q9UPR3 1016 aaKnown RBP12.68□□□□□ -0.38
HDAC8-214ENST00000439122 CITO14578 2027 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.68□□□□□ -0.38
HDAC8-214ENST00000439122 A0A1W2PPM1 405 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 KRT4P19013 534 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 ROR1Q01973 937 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 DNAJC3Q13217 504 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 DPYSL3Q14195 570 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 GOLGA7BQ2TAP0 167 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 SYCP2LQ5T4T6 812 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 CGB2Q6NT52 195 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 SCYL2Q6P3W7 929 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 CCDC63Q8NA47 563 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 FBF1Q8TES7 1133 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 PLCD4Q9BRC7 762 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 MIS12Q9H081 205 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 KIAA1257Q9ULG3 409 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 TMEM62Q0P6H9 643 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 KRT81Q14533 505 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 GRIK4Q16099 956 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 KIZQ2M2Z5 673 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 EFHC2Q5JST6 749 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 FAM182AQ5T1J6 154 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 PPP1R26Q5T8A7 1209 aaPredicted RBP12.67□□□□□ -0.38
HDAC8-214ENST00000439122 GBP7Q8N8V2 638 aaPredicted RBP12.67□□□□□ -0.38
HDAC8-214ENST00000439122 DENND1AQ8TEH3 1009 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 SPOCK2Q92563 424 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 RMDN2Q96LZ7 410 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 WDR83Q9BRX9 315 aaKnown RBP12.67□□□□□ -0.38
HDAC8-214ENST00000439122 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.67□□□□□ -0.38
HDAC8-214ENST00000439122 PRKAG3Q9UGI9 489 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 SNX9Q9Y5X1 595 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 COL1A2P08123 1366 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 ZSWIM8A7E2V4 1837 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 KAT6AQ92794 2004 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 H7C0C1 242 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 PFKMP08237 780 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 GBP2P32456 591 aaPredicted RBP12.67□□□□□ -0.38
HDAC8-214ENST00000439122 EPHX2P34913 555 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 ATP5OP48047 213 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 RNASELQ05823 741 aaKnown RBP12.67□□□□□ -0.38
HDAC8-214ENST00000439122 SNCBQ16143 134 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 PMF1Q6P1K2 205 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 C1orf228Q6PIY5 440 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 CYP4V2Q6ZWL3 525 aaPredicted RBP12.67□□□□□ -0.38
HDAC8-214ENST00000439122 TBC1D1Q86TI0 1168 aaPredicted RBP12.67□□□□□ -0.38
HDAC8-214ENST00000439122 ACOT1Q86TX2 421 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 TTC39CQ8N584 583 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 FITM2Q8N6M3 262 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 GRAMD1AQ96CP6 724 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 SLC10A4Q96EP9 437 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 THOC1Q96FV9 657 aaKnown RBP12.67□□□□□ -0.38
HDAC8-214ENST00000439122 PAFAH2Q99487 392 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 MRPL45Q9BRJ2 306 aaKnown RBP12.67□□□□□ -0.38
HDAC8-214ENST00000439122 PHACTR1Q9C0D0 580 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 CXCL16Q9H2A7 254 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 CD248Q9HCU0 757 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 NGRNQ9NPE2 291 aaKnown RBP12.67□□□□□ -0.38
HDAC8-214ENST00000439122 FAM49BQ9NUQ9 324 aa12.67□□□□□ -0.38
HDAC8-214ENST00000439122 TRIP11Q15643 1979 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 E7ESA3 106 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 NPTXRO95502 500 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 STIP1P31948 543 aaKnown RBP12.66□□□□□ -0.38
HDAC8-214ENST00000439122 SLC18A1P54219 525 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 TFDP2Q14188 446 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 NOMO1Q15155 1222 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 RASA2Q15283 850 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 KLHL38Q2WGJ6 581 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 CCDC14Q49A88 953 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 FAM47CQ5HY64 1035 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 MARCH8Q5T0T0 291 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 HHATQ5VTY9 493 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 C9orf131Q5VYM1 1079 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 USP50Q70EL3 339 aaPredicted RBP12.66□□□□□ -0.38
HDAC8-214ENST00000439122 NT5DC4Q86YG4 428 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 MAP7D3Q8IWC1 876 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 SCUBE3Q8IX30 993 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 EMID1Q96A84 441 aaPredicted RBP12.66□□□□□ -0.38
HDAC8-214ENST00000439122 ACSS3Q9H6R3 686 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 ECT2Q9H8V3 914 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 RXFP1Q9HBX9 757 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 GBA2Q9HCG7 927 aaPredicted RBP12.66□□□□□ -0.38
HDAC8-214ENST00000439122 GRID1Q9ULK0 1009 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 ZMYND8Q9ULU4 1186 aaPredicted RBP12.66□□□□□ -0.38
HDAC8-214ENST00000439122 CHMP2BQ9UQN3 213 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 HEY1Q9Y5J3 304 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 PLXNA1Q9UIW2 1896 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 SCN1AP35498 2009 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms