RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 SRSF5Q13243 272 aaKnown RBP19.61■□□□□ 0.73
AC004540.1-201ENST00000439120 RSPO4Q2I0M5 234 aaPredicted RBP19.61■□□□□ 0.73
AC004540.1-201ENST00000439120 NUP93Q8N1F7 819 aa19.61■□□□□ 0.73
AC004540.1-201ENST00000439120 PDZD8Q8NEN9 1154 aa19.61■□□□□ 0.73
AC004540.1-201ENST00000439120 TMC2Q8TDI7 906 aa19.61■□□□□ 0.73
AC004540.1-201ENST00000439120 FBXO32Q969P5 355 aa19.61■□□□□ 0.73
AC004540.1-201ENST00000439120 CCDC34Q96HJ3 373 aa19.61■□□□□ 0.73
AC004540.1-201ENST00000439120 IMPG2Q9BZV3 1241 aa19.61■□□□□ 0.73
AC004540.1-201ENST00000439120 ZDHHC9Q9Y397 364 aa19.61■□□□□ 0.73
AC004540.1-201ENST00000439120 GTF3C3Q9Y5Q9 886 aa19.61■□□□□ 0.73
AC004540.1-201ENST00000439120 PRR5-ARHGAP8B1AHC4 643 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 LEFTY2O00292 366 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 HRO43593 1189 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 VNN1O95497 513 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 RETP07949 1114 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 PRR29P0C7W0 189 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 SLC7A9P82251 487 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 ARHGAP8P85298 464 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 SPEM2Q0P670 501 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 ZACNQ401N2 412 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 PKN3Q6P5Z2 889 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 FAM35AQ86V20 835 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 WDR5BQ86VZ2 330 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 TAF4BQ92750 862 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 ELMO3Q96BJ8 720 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 SMARCD1Q96GM5 515 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 LINC00597Q9H2U6 94 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 DMAP1Q9NPF5 467 aaPredicted RBP19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 SMPD4Q9NXE4 827 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 CDV3Q9UKY7 258 aaKnown RBP19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 CPQQ9Y646 472 aa19.6■□□□□ 0.73
AC004540.1-201ENST00000439120 DCHS1Q96JQ0 3298 aa19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 SLC9A3R1O14745 358 aaPredicted RBP19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 IKBKBO14920 756 aa19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 RHOBTB3O94955 611 aa19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 MBL2P11226 248 aaPredicted RBP19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 KRT13P13646 458 aa19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 NR2F2P24468 414 aa19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 PXNP49023 591 aaPredicted RBP19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 KRBA2Q6ZNG9 492 aa19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 ACOT1Q86TX2 421 aa19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 DDX42Q86XP3 938 aaKnown RBP eCLIP19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 CCDC26Q8TAB7 109 aa19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 FBRSL1Q9HCM7 1045 aaKnown RBP19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 KRT82Q9NSB4 513 aa19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 TMEM30AQ9NV96 361 aa19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 MAPK8IP1Q9UQF2 711 aa19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 TRAF3IP3Q9Y228 551 aa19.59■□□□□ 0.73
AC004540.1-201ENST00000439120 FAM237AA0A1B0GTK4 181 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 A0A1W2PQ27 194 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 A0A1W2PQ64 194 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 A0A1W2PQD8 194 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 AP1G2O75843 785 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 OAS1P00973 400 aaKnown RBP19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 CCDC192P0DO97 292 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 RPL13P26373 211 aaKnown RBP19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 VAMP7P51809 220 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 DPYDQ12882 1025 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 NAIF1Q69YI7 327 aaPredicted RBP19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 INTS8Q75QN2 995 aaKnown RBP19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 SV2AQ7L0J3 742 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 FILIP1Q7Z7B0 1213 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 RPLP0P6Q8NHW5 317 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 OVCA2Q8WZ82 227 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 ACDQ96AP0 544 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 KCNK16Q96T55 309 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 RNF38Q9H0F5 515 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 SDCBP2Q9H190 292 aa19.58■□□□□ 0.72
AC004540.1-201ENST00000439120 GPR179Q6PRD1 2367 aa19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 MAPK13O15264 365 aa19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 LRP3O75074 770 aa19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 RPP40O75818 363 aaKnown RBP19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 OLFM2O95897 454 aa19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 HLA-DRAP01903 254 aa19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 NDST1P52848 882 aa19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 SLC5A3P53794 718 aa19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 CAMKK1Q8N5S9 505 aa19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 KIAA1958Q8N8K9 716 aa19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 CCDC150Q8NCX0 1101 aa19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 DNAI2Q9GZS0 605 aa19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 NACA2Q9H009 215 aa19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 PARD6AQ9NPB6 346 aa19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 DLL3Q9NYJ7 618 aa19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 CFAP97Q9P2B7 532 aa19.57■□□□□ 0.72
AC004540.1-201ENST00000439120 ATG2BQ96BY7 2078 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 CCDC163A0A0D9SF12 145 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 ZNF202O95125 648 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 ASS1P00966 412 aaKnown RBP19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 CCDC130P13994 396 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 ZXDBP98169 803 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 ORC1Q13415 861 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 HECTD3Q5T447 861 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 SPOPLQ6IQ16 392 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 UNC93AQ86WB7 457 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 FAM186BQ8IYM0 893 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 FUKQ8N0W3 1084 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 GUF1Q8N442 669 aaKnown RBP19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 FAM160A2Q8N612 972 aaPredicted RBP19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 SLC2A14Q8TDB8 520 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 GAB3Q8WWW8 586 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms