RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 FLCNQ8NFG4 579 aa14.05□□□□□ -0.16
LINC00399-201ENST00000439008 CHFRQ96EP1 664 aa14.05□□□□□ -0.16
LINC00399-201ENST00000439008 BRD9Q9H8M2 597 aa14.05□□□□□ -0.16
LINC00399-201ENST00000439008 SIX2Q9NPC8 291 aa14.05□□□□□ -0.16
LINC00399-201ENST00000439008 TDP1Q9NUW8 608 aa14.05□□□□□ -0.16
LINC00399-201ENST00000439008 OSER1Q9NX31 292 aa14.05□□□□□ -0.16
LINC00399-201ENST00000439008 GMIPQ9P107 970 aa14.05□□□□□ -0.16
LINC00399-201ENST00000439008 WDR87Q6ZQQ6 2873 aa14.05□□□□□ -0.16
LINC00399-201ENST00000439008 MIA3Q5JRA6 1907 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 MYOFQ9NZM1 2061 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 GABBR2O75899 941 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 FGFR1OPO95684 399 aaKnown RBP14.04□□□□□ -0.16
LINC00399-201ENST00000439008 OLFM2O95897 454 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 MBD3O95983 291 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 OAS1P00973 400 aaKnown RBP14.04□□□□□ -0.16
LINC00399-201ENST00000439008 ZDHHC11BP0C7U3 371 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 DDX6P26196 483 aaKnown RBP eCLIP14.04□□□□□ -0.16
LINC00399-201ENST00000439008 YWHAQP27348 245 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 SOX9P48436 509 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 ZNF132P52740 706 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 FZD5Q13467 585 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 MLF2Q15773 248 aaPredicted RBP14.04□□□□□ -0.16
LINC00399-201ENST00000439008 CCDC183Q5T5S1 534 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 ARHGAP17Q68EM7 881 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 TRIM68Q6AZZ1 485 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 PRSS33Q8NF86 280 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 TTC8Q8TAM2 541 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 BPIFB1Q8TDL5 484 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 DEPDC1BQ8WUY9 529 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 FBXO32Q969P5 355 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 WBP2Q969T9 261 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 DUSP16Q9BY84 665 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 HSD3B7Q9H2F3 369 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 NMUR1Q9HB89 426 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 OBP2AQ9NY56 170 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 GTSE1Q9NYZ3 720 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 TRPM5Q9NZQ8 1165 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 DLGAP2Q9P1A6 1054 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 ATP8B3O60423 1300 aa14.04□□□□□ -0.16
LINC00399-201ENST00000439008 O00370 1275 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 ZNF263O14978 683 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 CHADO15335 359 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 CYP26A1O43174 497 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 RTN3O95197 1032 aaPredicted RBP14.03□□□□□ -0.16
LINC00399-201ENST00000439008 ARSAP15289 507 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 HDCP19113 662 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 AOC1P19801 751 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 TBXAS1P24557 533 aaPredicted RBP14.03□□□□□ -0.16
LINC00399-201ENST00000439008 PON1P27169 355 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 AVPR1AP37288 418 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 MTIF2P46199 727 aaKnown RBP14.03□□□□□ -0.16
LINC00399-201ENST00000439008 KIF11P52732 1056 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 GCNT1Q02742 428 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 KCNMA1Q12791 1236 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 ZNF77Q15935 545 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 PKDCCQ504Y2 493 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 CDKAL1Q5VV42 579 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 TRIM65Q6PJ69 517 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 TMEM270Q6UE05 265 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 SCD5Q86SK9 330 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 CELF5Q8N6W0 485 aaKnown RBP14.03□□□□□ -0.16
LINC00399-201ENST00000439008 ENOX1Q8TC92 643 aaKnown RBP14.03□□□□□ -0.16
LINC00399-201ENST00000439008 E2F7Q96AV8 911 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 ZFRQ96KR1 1074 aaKnown RBP14.03□□□□□ -0.16
LINC00399-201ENST00000439008 FAM83CQ9BQN1 747 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 MFSD1Q9H3U5 465 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 CCSER2Q9H7U1 834 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 ACP6Q9NPH0 428 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 TRPV5Q9NQA5 729 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 HPS4Q9NQG7 708 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 GKN1Q9NS71 199 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 CNTN6Q9UQ52 1028 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 NFE2L3Q9Y4A8 694 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 PCDHB4Q9Y5E5 795 aa14.03□□□□□ -0.16
LINC00399-201ENST00000439008 TRAV19A0A0A6YYK7 116 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 SOBPA7XYQ1 873 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 BECN2A8MW95 431 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 KCNJ18B7U540 433 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 DPYSL4O14531 572 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 SCAMP3O14828 347 aaKnown RBP14.02□□□□□ -0.17
LINC00399-201ENST00000439008 COCHO43405 550 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 ABL1P00519 1130 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 CKMP06732 381 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 DCNP07585 359 aaKnown RBP14.02□□□□□ -0.17
LINC00399-201ENST00000439008 USP17L7P0C7H9 530 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 BRD2P25440 801 aaKnown RBP14.02□□□□□ -0.17
LINC00399-201ENST00000439008 TARSP26639 723 aaKnown RBP14.02□□□□□ -0.17
LINC00399-201ENST00000439008 CLCN5P51795 746 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 PDE4CQ08493 712 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 USP4Q13107 963 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 KCNJ12Q14500 433 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 ZNF268Q14587 947 aaPredicted RBP14.02□□□□□ -0.17
LINC00399-201ENST00000439008 NCAPHQ15003 741 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 MAN2A1Q16706 1144 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 TPD52L1Q16890 204 aaPredicted RBP14.02□□□□□ -0.17
LINC00399-201ENST00000439008 GOLGA7BQ2TAP0 167 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 TCP11X2Q5H9J9 407 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 SNX30Q5VWJ9 437 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 NAIF1Q69YI7 327 aaPredicted RBP14.02□□□□□ -0.17
LINC00399-201ENST00000439008 TXNDC11Q6PKC3 985 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms