RNA–Protein interactions for RNA: ENST00000437999.5

CCDC93-203, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-203ENST00000437999 TARS2Q9BW92 718 aaKnown RBP5.72□□□□□ -1.49
CCDC93-203ENST00000437999 MRPL9Q9BYD2 267 aaKnown RBP5.72□□□□□ -1.49
CCDC93-203ENST00000437999 RHOBTB2Q9BYZ6 727 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 C2orf40Q9H1Z8 148 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 FZD8Q9H461 694 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 ZHX3Q9H4I2 956 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 NRDE2Q9H7Z3 1164 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 UBE2ZQ9H832 354 aaPredicted RBP5.72□□□□□ -1.49
CCDC93-203ENST00000437999 RSAD1Q9HA92 442 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 NGRNQ9NPE2 291 aaKnown RBP5.72□□□□□ -1.49
CCDC93-203ENST00000437999 TLR9Q9NR96 1032 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 TBC1D13Q9NVG8 400 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 OBP2AQ9NY56 170 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 SPG21Q9NZD8 308 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 CCDC39Q9UFE4 941 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 MTMR6Q9Y217 621 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 HES2Q9Y543 173 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 IPPQ9Y573 584 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 SNX11Q9Y5W9 270 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 CLIC4Q9Y696 253 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 CAPN6Q9Y6Q1 641 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 BRWD1Q9NSI6 2320 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 ARID1BQ8NFD5 2236 aaPredicted RBP5.72□□□□□ -1.49
CCDC93-203ENST00000437999 CNTNAP2Q9UHC6 1331 aa5.72□□□□□ -1.49
CCDC93-203ENST00000437999 MYH11P35749 1972 aa5.71□□□□□ -1.49
CCDC93-203ENST00000437999 H3BQ06 376 aaPredicted RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 ACKR2O00590 384 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 PER2O15055 1255 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 LINC01565O15544 149 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 NCK2O43639 380 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 STX6O43752 255 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 B4GALT3O60512 393 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 HIP1RO75146 1068 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 ZC3H11AO75152 810 aaKnown RBP eCLIP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 RFPL3O75679 317 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 DDHD2O94830 711 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 UBOX5O94941 541 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 NPTXRO95502 500 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 BMP15O95972 392 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 EDN1P05305 212 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 PRKCBP05771 671 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 GALTP07902 379 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 PLA2G4BP0C869 781 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 ITIH2P19823 946 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 AKAP5P24588 427 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 PPM1AP35813 382 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 LONP1P36776 959 aaKnown RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 LTBRP36941 435 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 UBA7P41226 1012 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 HTR3AP46098 478 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 ALDH7A1P49419 539 aaKnown RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 CLCN7P51798 805 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 SLC12A3P55017 1021 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 PEX3P56589 373 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 CEBPZQ03701 1054 aaKnown RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 KRT17Q04695 432 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 RNASELQ05823 741 aaKnown RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 DLX2Q07687 328 aaPredicted RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 MAPK7Q13164 816 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 PRPF4BQ13523 1007 aaKnown RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 PTPAQ15257 358 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 FAM187BQ17R55 369 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 LEXMQ3ZCV2 418 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 TMEM119Q4V9L6 283 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 SPECC1Q5M775 1068 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 FBXW10Q5XX13 1052 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 ICE2Q659A1 982 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 SLC27A1Q6PCB7 646 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 C1orf186Q6ZWK4 172 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 RBM23Q86U06 439 aaKnown RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 TMEM173Q86WV6 379 aaPredicted RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 ZNF280BQ86YH2 543 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 HSCBQ8IWL3 235 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 DAW1Q8N136 415 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 TAB3Q8N5C8 712 aaPredicted RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 URGCPQ8TCY9 931 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 LRRC15Q8TF66 581 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 RNF141Q8WVD5 230 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 RSPH1Q8WYR4 309 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 CDK5RAP3Q96JB5 506 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 FBXL18Q96ME1 805 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 KREMEN1Q96MU8 473 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 GAD1Q99259 594 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 TCF25Q9BQ70 676 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 APOL6Q9BWW8 343 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 TRIM6Q9C030 488 aaPredicted RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 NT5C3AQ9H0P0 336 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 GBP3Q9H0R5 595 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 NXF3Q9H4D5 531 aaKnown RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 ZSCAN16Q9H4T2 348 aaPredicted RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 TLE6Q9H808 572 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 UBN1Q9NPG3 1134 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 PRMT7Q9NVM4 692 aaPredicted RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 MIOSQ9NXC5 875 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 CLDND1Q9NY35 253 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 DNAJB4Q9UDY4 337 aa5.71□□□□□ -1.5
CCDC93-203ENST00000437999 PUF60Q9UHX1 559 aaKnown RBP5.71□□□□□ -1.5
CCDC93-203ENST00000437999 TDRD15B5MCY1 1934 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms