RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 TULP2O00295 520 aa26.94■■□□□ 1.9
CPNE1-216ENST00000437340 NDC80O14777 642 aa26.94■■□□□ 1.9
CPNE1-216ENST00000437340 DESP17661 470 aa26.94■■□□□ 1.9
CPNE1-216ENST00000437340 KCNT1Q5JUK3 1230 aa26.94■■□□□ 1.9
CPNE1-216ENST00000437340 CEP128Q6ZU80 1094 aa26.94■■□□□ 1.9
CPNE1-216ENST00000437340 SLC35B2Q8TB61 432 aa26.94■■□□□ 1.9
CPNE1-216ENST00000437340 FAM105AQ9NUU6 356 aa26.94■■□□□ 1.9
CPNE1-216ENST00000437340 PCSK1NQ9UHG2 260 aa26.94■■□□□ 1.9
CPNE1-216ENST00000437340 ERICH4A6NGS2 130 aa26.94■■□□□ 1.9
CPNE1-216ENST00000437340 MYCNP04198 464 aaPredicted RBP26.94■■□□□ 1.9
CPNE1-216ENST00000437340 MGAT3Q09327 533 aa26.94■■□□□ 1.9
CPNE1-216ENST00000437340 TRNP1Q6NT89 227 aa26.94■■□□□ 1.9
CPNE1-216ENST00000437340 ADGRF2Q8IZF7 708 aa26.94■■□□□ 1.9
CPNE1-216ENST00000437340 PIWIL1Q96J94 861 aaKnown RBP26.94■■□□□ 1.9
CPNE1-216ENST00000437340 CENPHQ9H3R5 247 aa26.94■■□□□ 1.9
CPNE1-216ENST00000437340 RSAD1Q9HA92 442 aa26.94■■□□□ 1.9
CPNE1-216ENST00000437340 GPR182O15218 404 aa26.93■■□□□ 1.9
CPNE1-216ENST00000437340 PAPSS1O43252 624 aaPredicted RBP26.93■■□□□ 1.9
CPNE1-216ENST00000437340 ENDOD1O94919 500 aa26.93■■□□□ 1.9
CPNE1-216ENST00000437340 CHRNA1P02708 482 aa26.93■■□□□ 1.9
CPNE1-216ENST00000437340 PDGFRBP09619 1106 aa26.93■■□□□ 1.9
CPNE1-216ENST00000437340 CST5P28325 142 aaPredicted RBP26.93■■□□□ 1.9
CPNE1-216ENST00000437340 ACADSBP45954 432 aa26.93■■□□□ 1.9
CPNE1-216ENST00000437340 FAM47CQ5HY64 1035 aa26.93■■□□□ 1.9
CPNE1-216ENST00000437340 CCSAPQ6IQ19 270 aaPredicted RBP26.93■■□□□ 1.9
CPNE1-216ENST00000437340 ARCQ7LC44 396 aa26.93■■□□□ 1.9
CPNE1-216ENST00000437340 PIK3R2O00459 728 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 CST8O60676 142 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 LMO2P25791 158 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 KCNA10Q16322 511 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 CCDC14Q49A88 953 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 IZUMO3Q5VZ72 239 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 CCDC25Q86WR0 208 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 WNT8BQ93098 351 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 PGM2Q96G03 612 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 HSFY1Q96LI6 401 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 PRPSAP2O60256 369 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 SHBGP04278 402 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 ASGR1P07306 291 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 BOLA3Q53S33 107 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 DNAJC21Q5F1R6 531 aaKnown RBP26.92■■□□□ 1.9
CPNE1-216ENST00000437340 HIBCHQ6NVY1 386 aaPredicted RBP26.92■■□□□ 1.9
CPNE1-216ENST00000437340 RELL1Q8IUW5 271 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 KHSRPQ92945 711 aaKnown RBP eCLIP26.92■■□□□ 1.98e-8■■■□□ 15.7
CPNE1-216ENST00000437340 PEBP4Q96S96 227 aa26.92■■□□□ 1.9
CPNE1-216ENST00000437340 BRCA2P51587 3418 aa26.91■■□□□ 1.9
CPNE1-216ENST00000437340 CCDC130P13994 396 aa26.91■■□□□ 1.9
CPNE1-216ENST00000437340 SDC4P31431 198 aa26.91■■□□□ 1.9
CPNE1-216ENST00000437340 VPS41P49754 854 aa26.91■■□□□ 1.9
CPNE1-216ENST00000437340 IRAK1P51617 712 aa26.91■■□□□ 1.9
CPNE1-216ENST00000437340 CYP4V2Q6ZWL3 525 aaPredicted RBP26.91■■□□□ 1.9
CPNE1-216ENST00000437340 SH3TC2Q8TF17 1288 aa26.91■■□□□ 1.9
CPNE1-216ENST00000437340 TEKT4Q8WW24 435 aa26.91■■□□□ 1.9
CPNE1-216ENST00000437340 HSPH1Q92598 858 aa26.91■■□□□ 1.9
CPNE1-216ENST00000437340 ZFP42Q96MM3 310 aa26.91■■□□□ 1.9
CPNE1-216ENST00000437340 TBCBQ99426 244 aa26.91■■□□□ 1.9
CPNE1-216ENST00000437340 CDC42EP4Q9H3Q1 356 aaKnown RBP26.91■■□□□ 1.9
CPNE1-216ENST00000437340 PCDH9Q9HC56 1237 aa26.91■■□□□ 1.9
CPNE1-216ENST00000437340 HMX1Q9NP08 348 aaPredicted RBP26.91■■□□□ 1.9
CPNE1-216ENST00000437340 GIT1Q9Y2X7 761 aa26.91■■□□□ 1.9
CPNE1-216ENST00000437340 APOC4-APOC2K7ER74 178 aa26.9■■□□□ 1.9
CPNE1-216ENST00000437340 DNALI1O14645 258 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-216ENST00000437340 GABBR2O75899 941 aa26.9■■□□□ 1.9
CPNE1-216ENST00000437340 APOC2P02655 101 aa26.9■■□□□ 1.9
CPNE1-216ENST00000437340 CTSHP09668 335 aa26.9■■□□□ 1.9
CPNE1-216ENST00000437340 CHKAP35790 457 aa26.9■■□□□ 1.9
CPNE1-216ENST00000437340 OTUD4Q01804 1114 aaKnown RBP26.9■■□□□ 1.9
CPNE1-216ENST00000437340 C15orf59Q2T9L4 293 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-216ENST00000437340 P3H1Q32P28 736 aa26.9■■□□□ 1.9
CPNE1-216ENST00000437340 C6orf118Q5T5N4 469 aa26.9■■□□□ 1.9
CPNE1-216ENST00000437340 ZNF618Q5T7W0 954 aa26.9■■□□□ 1.9
CPNE1-216ENST00000437340 SLC26A9Q7LBE3 791 aa26.9■■□□□ 1.9
CPNE1-216ENST00000437340 VSIG1Q86XK7 387 aa26.9■■□□□ 1.9
CPNE1-216ENST00000437340 SCUBE3Q8IX30 993 aa26.9■■□□□ 1.9
CPNE1-216ENST00000437340 ACTL9Q8TC94 416 aa26.9■■□□□ 1.9
CPNE1-216ENST00000437340 TLCD1Q96CP7 247 aa26.9■■□□□ 1.9
CPNE1-216ENST00000437340 ROPN1BQ9BZX4 212 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-216ENST00000437340 TSPYL2Q9H2G4 693 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-216ENST00000437340 ROPN1Q9HAT0 212 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-216ENST00000437340 HCRTO43612 131 aa26.89■■□□□ 1.9
CPNE1-216ENST00000437340 GRAP2O75791 330 aa26.89■■□□□ 1.9
CPNE1-216ENST00000437340 CD48P09326 243 aa26.89■■□□□ 1.9
CPNE1-216ENST00000437340 ADORA2BP29275 332 aa26.89■■□□□ 1.9
CPNE1-216ENST00000437340 ARSEP51690 589 aa26.89■■□□□ 1.9
CPNE1-216ENST00000437340 PLCB3Q01970 1234 aa26.89■■□□□ 1.9
CPNE1-216ENST00000437340 PDK2Q15119 407 aa26.89■■□□□ 1.9
CPNE1-216ENST00000437340 SH3PXD2AQ5TCZ1 1133 aa26.89■■□□□ 1.9
CPNE1-216ENST00000437340 MRPL10Q7Z7H8 261 aaKnown RBP26.89■■□□□ 1.9
CPNE1-216ENST00000437340 MAP7D3Q8IWC1 876 aa26.89■■□□□ 1.9
CPNE1-216ENST00000437340 GSTCDQ8NEC7 633 aa26.89■■□□□ 1.9
CPNE1-216ENST00000437340 HAUS1Q96CS2 278 aa26.89■■□□□ 1.9
CPNE1-216ENST00000437340 HNRNPABQ99729 332 aaKnown RBP26.89■■□□□ 1.9
CPNE1-216ENST00000437340 BCCIPQ9P287 314 aaKnown RBP eCLIP26.89■■□□□ 1.95e-7■■■□□ 17.8
CPNE1-216ENST00000437340 CYB561D2O14569 222 aa26.89■■□□□ 1.89
CPNE1-216ENST00000437340 PTPN9P43378 593 aa26.89■■□□□ 1.89
CPNE1-216ENST00000437340 GNGT1P63211 74 aa26.89■■□□□ 1.89
CPNE1-216ENST00000437340 ZSCAN26Q16670 478 aa26.89■■□□□ 1.89
CPNE1-216ENST00000437340 LHX8Q68G74 356 aa26.89■■□□□ 1.89
CPNE1-216ENST00000437340 RFX6Q8HWS3 928 aa26.89■■□□□ 1.89
CPNE1-216ENST00000437340 DNAJC5GQ8N7S2 189 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms