RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 CPVLQ9H3G5 476 aa8.06□□□□□ -1.12
CNKSR3-202ENST00000433165 EBF3Q9H4W6 596 aa8.06□□□□□ -1.12
CNKSR3-202ENST00000433165 TIMMDC1Q9NPL8 285 aa8.06□□□□□ -1.12
CNKSR3-202ENST00000433165 DNAJC17Q9NVM6 304 aaKnown RBP8.06□□□□□ -1.12
CNKSR3-202ENST00000433165 HEY2Q9UBP5 337 aa8.06□□□□□ -1.12
CNKSR3-202ENST00000433165 SSX2IPQ9Y2D8 614 aa8.06□□□□□ -1.12
CNKSR3-202ENST00000433165 KIAA1217Q5T5P2 1943 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 TMEM265A0A087WTH1 108 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 NPHP3-ACAD11A0A0J9YXS1 232 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 ZNF862O60290 1169 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 ATF2P15336 505 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 PGM1P36871 562 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 CD97P48960 835 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 EMP3P54852 163 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 ACTR3P61158 418 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 CDK16Q00536 496 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 PURAQ00577 322 aaKnown RBP8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 SGO2Q562F6 1265 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 PCNX4Q63HM2 1172 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 CCDC62Q6P9F0 684 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 B3GNT6Q6ZMB0 384 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 SATL1Q86VE3 508 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 VSIG10LQ86VR7 867 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 FAM126BQ8IXS8 530 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 SYT2Q8N9I0 419 aaPredicted RBP8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 OR6Y1Q8NGX8 325 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 RFWD2Q8NHY2 731 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 PPTC7Q8NI37 304 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 GRK7Q8WTQ7 553 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 RSPH1Q8WYR4 309 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 HAUS1Q96CS2 278 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 FOXP3Q9BZS1 431 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 PSTPIP2Q9H939 334 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 C17orf75Q9HAS0 396 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 ARHGEF4Q9NR80 690 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 PDGFCQ9NRA1 345 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 TMEM260Q9NX78 707 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 ANAPC5Q9UJX4 755 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 DNAJC12Q9UKB3 198 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 PAIP2BQ9ULR5 123 aaKnown RBP8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 NEU2Q9Y3R4 380 aa8.05□□□□□ -1.12
CNKSR3-202ENST00000433165 EXOC1LA0A1B0GW35 172 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 MYADML2A6NDP7 307 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 E9PMD0 336 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 VILLO15195 856 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 TGDSO95455 350 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 NR3C1P04150 777 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 RPLP2P05387 115 aaKnown RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 DLATP10515 647 aaKnown RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 ESRRAP11474 423 aaPredicted RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 CDK4P11802 303 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 MYCLP12524 364 aaPredicted RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 UQCRBP14927 111 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 CA4P22748 312 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 ICAM3P32942 547 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 CASP4P49662 377 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 ADARP55265 1226 aaKnown RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 GPC5P78333 572 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 XIAPP98170 497 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 BEX3Q00994 111 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 FAAP100Q0VG06 881 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 ASPHQ12797 758 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 AP3B2Q13367 1082 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 MED21Q13503 144 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 BFSP2Q13515 415 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 MAPK6Q16659 721 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 ARSHQ5FYA8 562 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 CFAP157Q5JU67 520 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 FAM109BQ6ICB4 259 aaPredicted RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 CXCL17Q6UXB2 119 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 PRUNE1Q86TP1 453 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 BBOF1Q8ND07 529 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 PSPC1Q8WXF1 523 aaKnown RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 HAS1Q92839 578 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 NMD3Q96D46 503 aaKnown RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 CFAP57Q96MR6 1250 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 PRICKLE1Q96MT3 831 aaPredicted RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 FAM161BQ96MY7 647 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 PANX3Q96QZ0 392 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 TRIM55Q9BYV6 548 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 PPCSQ9HAB8 311 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 TBCCD1Q9NVR7 557 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 CLIC5Q9NZA1 410 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 TBX21Q9UL17 535 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 NOD1Q9Y239 953 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 MTO1Q9Y2Z2 717 aaKnown RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 hCG_2014768A0A024R1R8 64 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 ADCY6O43306 1168 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 OPHN1O60890 802 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 PPP1R11O60927 126 aaPredicted RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 FKBP6O75344 327 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 TM7SF2O76062 418 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 OR6B1O95007 311 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 CD4P01730 458 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 FTLP02792 175 aaPredicted RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 HNRNPCP07910 306 aaKnown RBP eCLIP8.04□□□□□ -1.125e-7■■■■□ 21.2
CNKSR3-202ENST00000433165 MMP3P08254 477 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 SMIM18P0DKX4 95 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 CPA3P15088 417 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms