RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 FUKQ8N0W3 1084 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 GOLGA6L1Q8N7Z2 621 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 KCTD6Q8NC69 237 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 ZNF296Q8WUU4 475 aaPredicted RBP17.48■□□□□ 0.39
USHBP1-203ENST00000431146 NDRG1Q92597 394 aaKnown RBP17.48■□□□□ 0.39
USHBP1-203ENST00000431146 NGRNQ9NPE2 291 aaKnown RBP17.48■□□□□ 0.39
USHBP1-203ENST00000431146 FRMPD3Q5JV73 1810 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 LIASO43766 372 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 PTPN1P18031 435 aaKnown RBP17.48■□□□□ 0.39
USHBP1-203ENST00000431146 PTK6Q13882 451 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 UBAP2Q5T6F2 1119 aaKnown RBP17.48■□□□□ 0.39
USHBP1-203ENST00000431146 SCYL2Q6P3W7 929 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 DSTYKQ6XUX3 929 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 CYP4V2Q6ZWL3 525 aaPredicted RBP17.48■□□□□ 0.39
USHBP1-203ENST00000431146 GSTA5Q7RTV2 222 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 GLIS1Q8NBF1 620 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 GRK7Q8WTQ7 553 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 CALN1Q9BXU9 219 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 HMX1Q9NP08 348 aaPredicted RBP17.48■□□□□ 0.39
USHBP1-203ENST00000431146 HOMER3Q9NSC5 361 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 GABRDO14764 452 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 TP73O15350 636 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 ZNF623O75123 536 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 GAS8O95995 478 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 MMRN1Q13201 1228 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 MBTPS1Q14703 1052 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 UPP1Q16831 310 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 KCTD16Q68DU8 428 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 PAQR9Q6ZVX9 377 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 STK32AQ8WU08 396 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 FAM172AQ8WUF8 416 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 ART4Q93070 314 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 TXLNGYQ9BZA5 131 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 C10orf88Q9H8K7 445 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 CRTAC1Q9NQ79 661 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.47■□□□□ 0.39
USHBP1-203ENST00000431146 GPATCH2LQ9NWQ4 482 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 MOXD2PA6NHM9 499 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 OPA1O60313 960 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 CST8O60676 142 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 PPFIA2O75334 1257 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 IVDP26440 423 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 ADCY8P40145 1251 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 RAB27AP51159 221 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 CALCOCO2Q13137 446 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 BYSLQ13895 437 aaKnown RBP17.47■□□□□ 0.39
USHBP1-203ENST00000431146 ACAP1Q15027 740 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 TIGD5Q53EQ6 642 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 FAM26DQ5JW98 314 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 CEP85LQ5SZL2 805 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 PIGZQ86VD9 579 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 CCDC25Q86WR0 208 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 SH3TC2Q8TF17 1288 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 MED10Q9BTT4 135 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 ADAM33Q9BZ11 813 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 LRRC4CQ9HCJ2 640 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 STARD7Q9NQZ5 370 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 ZNF148Q9UQR1 794 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 NEU2Q9Y3R4 380 aa17.47■□□□□ 0.39
USHBP1-203ENST00000431146 F8W810 466 aa17.46■□□□□ 0.39
USHBP1-203ENST00000431146 H0YGN5 161 aa17.46■□□□□ 0.39
USHBP1-203ENST00000431146 ZSCAN5DPP0CG00 497 aa17.46■□□□□ 0.39
USHBP1-203ENST00000431146 ETS1P14921 441 aa17.46■□□□□ 0.39
USHBP1-203ENST00000431146 SDC4P31431 198 aa17.46■□□□□ 0.39
USHBP1-203ENST00000431146 GRK4P32298 578 aa17.46■□□□□ 0.39
USHBP1-203ENST00000431146 PTPN7P35236 360 aa17.46■□□□□ 0.39
USHBP1-203ENST00000431146 PCK1P35558 622 aa17.46■□□□□ 0.39
USHBP1-203ENST00000431146 MAP2K2P36507 400 aa17.46■□□□□ 0.39
USHBP1-203ENST00000431146 ATXN1P54253 815 aaKnown RBP17.46■□□□□ 0.39
USHBP1-203ENST00000431146 PLCB3Q01970 1234 aa17.46■□□□□ 0.39
USHBP1-203ENST00000431146 ZNF365Q70YC5 407 aa17.46■□□□□ 0.39
USHBP1-203ENST00000431146 HNRNPABQ99729 332 aaKnown RBP17.46■□□□□ 0.39
USHBP1-203ENST00000431146 YY1AP1Q9H869 796 aa17.46■□□□□ 0.39
USHBP1-203ENST00000431146 NFS1Q9Y697 457 aa17.46■□□□□ 0.39
USHBP1-203ENST00000431146 PTCH2Q9Y6C5 1203 aa17.46■□□□□ 0.39
USHBP1-203ENST00000431146 MKI67P46013 3256 aaKnown RBP17.46■□□□□ 0.39
USHBP1-203ENST00000431146 GOLGA6CA6NDK9 693 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 PRPSAP2O60256 369 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 B3GAT3O94766 335 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 GOLGA6DP0CG33 693 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 ATF2P15336 505 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 BRCC3P46736 316 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 CDH6P55285 790 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 ADIGQ0VDE8 80 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 TRAF7Q6Q0C0 670 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 RTN4RL1Q86UN2 441 aaPredicted RBP17.45■□□□□ 0.38
USHBP1-203ENST00000431146 RFX6Q8HWS3 928 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 SH2D3CQ8N5H7 860 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 CMASQ8NFW8 434 aaPredicted RBP17.45■□□□□ 0.38
USHBP1-203ENST00000431146 SNF8Q96H20 258 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 TMEM121Q9BTD3 319 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 TRAIPQ9BWF2 469 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 DUSP16Q9BY84 665 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 DNAJC17Q9NVM6 304 aaKnown RBP17.45■□□□□ 0.38
USHBP1-203ENST00000431146 GOLGA6AQ9NYA3 693 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 MTRF1LQ9UGC7 380 aaKnown RBP17.45■□□□□ 0.38
USHBP1-203ENST00000431146 FEZ2Q9UHY8 353 aaPredicted RBP17.45■□□□□ 0.38
USHBP1-203ENST00000431146 MYBPHLA2RUH7 354 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 FKTNO75072 461 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 NDUFV1P49821 464 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms