RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 AGAP9Q5VTM2 703 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 IFNLR1Q8IU57 520 aaPredicted RBP6.41□□□□□ -1.38
CHD8-202ENST00000430710 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.41□□□□□ -1.384e-6■■□□□ 12.7
CHD8-202ENST00000430710 AGAP3Q96P47 875 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 FEM1BQ9UK73 627 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 SH3GLB1Q9Y371 365 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 CNTNAP5Q8WYK1 1306 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 HEATR9A2RTY3 570 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 CYTH3O43739 400 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 CCDC130P13994 396 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 VEGFAP15692 232 aaPredicted RBP6.41□□□□□ -1.38
CHD8-202ENST00000430710 RAG1P15918 1043 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 CYP2B6P20813 491 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 GCLCP48506 637 aaPredicted RBP6.41□□□□□ -1.38
CHD8-202ENST00000430710 PRKAA2P54646 552 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 MTTPP55157 894 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 NME3Q13232 169 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 RIPK1Q13546 671 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 PTK6Q13882 451 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 ELMSAN1Q6PJG2 1045 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 ZNF554Q86TJ5 538 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 SLC26A11Q86WA9 606 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 MCRS1Q96EZ8 462 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 RMDN3Q96TC7 470 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 GAS2L1Q99501 681 aaPredicted RBP6.41□□□□□ -1.38
CHD8-202ENST00000430710 OLFM1Q99784 485 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 C9orf16Q9BUW7 83 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 POLR3FQ9H1D9 316 aaPredicted RBP6.41□□□□□ -1.38
CHD8-202ENST00000430710 CLEC4MQ9H2X3 399 aaPredicted RBP6.41□□□□□ -1.38
CHD8-202ENST00000430710 LMCD1Q9NZU5 365 aa6.41□□□□□ -1.38
CHD8-202ENST00000430710 R3HDM2Q9Y2K5 976 aaKnown RBP6.41□□□□□ -1.38
CHD8-202ENST00000430710 ERBB3P21860 1342 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 PDGFRAP16234 1089 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 KLHL12Q53G59 568 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 ZNF467Q7Z7K2 595 aaPredicted RBP6.4□□□□□ -1.38
CHD8-202ENST00000430710 THEM5Q8N1Q8 247 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 MARCH10Q8NA82 808 aaPredicted RBP6.4□□□□□ -1.38
CHD8-202ENST00000430710 DAGLBQ8NCG7 672 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 FBXO36Q8NEA4 188 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 EXD1Q8NHP7 514 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 FNIP1Q8TF40 1166 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 ZNF75CPQ92670 426 aaPredicted RBP6.4□□□□□ -1.38
CHD8-202ENST00000430710 DEPDC7Q96QD5 511 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 DCUN1D5Q9BTE7 237 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 GRIP2Q9C0E4 1043 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 MTFR1LQ9H019 292 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 CPVLQ9H3G5 476 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 CYLDQ9NQC7 956 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 H2AFY2Q9P0M6 372 aaPredicted RBP6.4□□□□□ -1.38
CHD8-202ENST00000430710 FBXO40Q9UH90 709 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 KLF15Q9UIH9 416 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 SHOC2Q9UQ13 582 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 C5orf58C9J3I9 102 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 ZNF197O14709 1029 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 ATMINO43313 823 aaPredicted RBP6.4□□□□□ -1.38
CHD8-202ENST00000430710 TSPAN9O75954 239 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 BGNP21810 368 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 YWHABP31946 246 aaKnown RBP6.4□□□□□ -1.38
CHD8-202ENST00000430710 RPL5P46777 297 aaKnown RBP6.4□□□□□ -1.38
CHD8-202ENST00000430710 NR1H2P55055 460 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 NCF4Q15080 339 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 SMAD1Q15797 465 aaKnown RBP6.4□□□□□ -1.38
CHD8-202ENST00000430710 QRICH1Q2TAL8 776 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 SBK1Q52WX2 424 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 SUSD4Q5VX71 490 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 ARMC3Q5W041 872 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 LINC00523Q86TU6 105 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 YAF2Q8IY57 180 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 FAM71DQ8N9W8 422 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 DIS3LQ8TF46 1054 aaKnown RBP6.4□□□□□ -1.38
CHD8-202ENST00000430710 TADA1Q96BN2 335 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 NDFIP2Q9NV92 336 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 HBS1LQ9Y450 684 aaKnown RBP6.4□□□□□ -1.38
CHD8-202ENST00000430710 CNOT3O75175 753 aaKnown RBP6.4□□□□□ -1.38
CHD8-202ENST00000430710 KRT6BP04259 564 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 RALBP11234 206 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 CDH3P22223 829 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 KRT6CP48668 564 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 NCOA4Q13772 614 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 ITGA9Q13797 1035 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 PKN2Q16513 984 aaKnown RBP6.4□□□□□ -1.38
CHD8-202ENST00000430710 KCTD21Q4G0X4 260 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 COBLL1Q53SF7 1204 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 AARS2Q5JTZ9 985 aaKnown RBP6.4□□□□□ -1.38
CHD8-202ENST00000430710 SPANXN2Q5MJ10 180 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 CCDC149Q6ZUS6 474 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 ILDR2Q71H61 639 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 ERO1BQ86YB8 467 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 FBXL16Q8N461 479 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 HDAC7Q8WUI4 952 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 GCNAQ96QF7 691 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 REXO4Q9GZR2 422 aaKnown RBP6.4□□□□□ -1.38
CHD8-202ENST00000430710 EHD4Q9H223 541 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 KBTBD4Q9NVX7 518 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 USE1Q9NZ43 259 aa6.4□□□□□ -1.38
CHD8-202ENST00000430710 RSL24D1Q9UHA3 163 aaKnown RBP6.4□□□□□ -1.38
CHD8-202ENST00000430710 FAM196BA6NMK8 535 aa6.4□□□□□ -1.39
CHD8-202ENST00000430710 TBC1D12O60347 775 aa6.4□□□□□ -1.39
CHD8-202ENST00000430710 S100A1P23297 94 aa6.4□□□□□ -1.39
CHD8-202ENST00000430710 JAK1P23458 1154 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms