RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 FOXN2P32314 431 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 ACOT2P49753 483 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 WDR4P57081 412 aaKnown RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 KCNJ2P63252 427 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 MTMR2Q13614 643 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 SHHQ15465 462 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 STXBP2Q15833 593 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 DUOXA2Q1HG44 320 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 SLC45A4Q5BKX6 768 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 WASHC2DQ5SRD0 308 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 NOL9Q5SY16 702 aaKnown RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 SNRNP48Q6IEG0 339 aaKnown RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 MFSD7Q6UXD7 560 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 ERICH1Q86X53 443 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 ECHDC2Q86YB7 292 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 SCYL3Q8IZE3 742 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 ZNF280CQ8ND82 737 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 CHST13Q8NET6 341 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 SLC35B2Q8TB61 432 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 TRIB2Q92519 343 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 ATG4CQ96DT6 458 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 FAM167AQ96KS9 214 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 PARK7Q99497 189 aaKnown RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 MRPL4Q9BYD3 311 aaKnown RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 MIS12Q9H081 205 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 C2orf40Q9H1Z8 148 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 VPS11Q9H270 941 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 FAM124BQ9H5Z6 455 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 VPS37BQ9H9H4 285 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 PICK1Q9NRD5 415 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 DNAJC17Q9NVM6 304 aaKnown RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 HOXC10Q9NYD6 342 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 TBK1Q9UHD2 729 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 NUB1Q9Y5A7 615 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 SMCHD1A6NHR9 2005 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.11□□□□□ -0.95
GABPB1-205ENST00000429662 A0A0G2JLL6 359 aaPredicted RBP9.11□□□□□ -0.95
GABPB1-205ENST00000429662 SIGLEC16A6NMB1 481 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 E7ESA3 106 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 POC1B-GALNT4F8VUJ3 575 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 SGK1O00141 431 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 C2CD2LO14523 706 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 TYROBPO43914 113 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 TOM1L1O75674 476 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 IL1BP01584 269 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 HMGCRP04035 888 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 CA4P22748 312 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 GCAP28676 217 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 CDKN2BP42772 138 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 CLNS1AP54105 237 aaKnown RBP9.11□□□□□ -0.95
GABPB1-205ENST00000429662 PDIA2Q13087 525 aaKnown RBP9.11□□□□□ -0.95
GABPB1-205ENST00000429662 TRPC3Q13507 836 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 E2F5Q15329 346 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 TAZQ16635 292 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 HIF1AQ16665 826 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 KCTD19Q17RG1 926 aaPredicted RBP9.11□□□□□ -0.95
GABPB1-205ENST00000429662 CMPK2Q5EBM0 449 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 TMEM63BQ5T3F8 832 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 IER5Q5VY09 327 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 SPOPLQ6IQ16 392 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 CGB2Q6NT52 195 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 BBS12Q6ZW61 710 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 TRMT1LQ7Z2T5 733 aaKnown RBP9.11□□□□□ -0.95
GABPB1-205ENST00000429662 PRRT2Q7Z6L0 340 aaPredicted RBP9.11□□□□□ -0.95
GABPB1-205ENST00000429662 PASD1Q8IV76 773 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 TEX9Q8N6V9 391 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 ASAP3Q8TDY4 903 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 AGAP11Q8TF27 550 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 PYROXD1Q8WU10 500 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 PRCCQ92733 491 aaPredicted RBP9.11□□□□□ -0.95
GABPB1-205ENST00000429662 PAIP2Q9BPZ3 127 aaKnown RBP9.11□□□□□ -0.95
GABPB1-205ENST00000429662 DHRS4Q9BTZ2 278 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 TARS2Q9BW92 718 aaKnown RBP9.11□□□□□ -0.95
GABPB1-205ENST00000429662 ACSS3Q9H6R3 686 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 ETNK1Q9HBU6 452 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 CYP39A1Q9NYL5 469 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 DONSONQ9NYP3 566 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 FBXO40Q9UH90 709 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 TSR3Q9UJK0 312 aaKnown RBP9.11□□□□□ -0.95
GABPB1-205ENST00000429662 AGTPBP1Q9UPW5 1226 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 IVNS1ABPQ9Y6Y0 642 aa9.11□□□□□ -0.95
GABPB1-205ENST00000429662 MYO9BQ13459 2157 aa9.1□□□□□ -0.95
GABPB1-205ENST00000429662 GBF1Q92538 1859 aa9.1□□□□□ -0.95
GABPB1-205ENST00000429662 IQANK1A0A1B0GTG1 560 aa9.1□□□□□ -0.95
GABPB1-205ENST00000429662 LRRD1A4D1F6 860 aa9.1□□□□□ -0.95
GABPB1-205ENST00000429662 TNPO2O14787 897 aaKnown RBP9.1□□□□□ -0.95
GABPB1-205ENST00000429662 OGTO15294 1046 aa9.1□□□□□ -0.95
GABPB1-205ENST00000429662 FAM155BO75949 473 aa9.1□□□□□ -0.95
GABPB1-205ENST00000429662 TGDSO95455 350 aa9.1□□□□□ -0.95
GABPB1-205ENST00000429662 GH1P01241 217 aa9.1□□□□□ -0.95
GABPB1-205ENST00000429662 TNNC2P02585 160 aa9.1□□□□□ -0.95
GABPB1-205ENST00000429662 ATP5BP06576 529 aaKnown RBP9.1□□□□□ -0.95
GABPB1-205ENST00000429662 KRT16P08779 473 aa9.1□□□□□ -0.95
GABPB1-205ENST00000429662 TGFB3P10600 412 aa9.1□□□□□ -0.95
GABPB1-205ENST00000429662 KRT10P13645 584 aa9.1□□□□□ -0.95
GABPB1-205ENST00000429662 FOSL2P15408 326 aa9.1□□□□□ -0.95
GABPB1-205ENST00000429662 STIP1P31948 543 aaKnown RBP9.1□□□□□ -0.95
GABPB1-205ENST00000429662 GJC1P36383 396 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms